Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SIX3O95343 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.15■□□□□ 0.82
SIX3O95343 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SIX3O95343 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.15■□□□□ 0.82
SIX3O95343 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.15■□□□□ 0.82
SIX3O95343 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SIX3O95343 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SIX3O95343 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.15■□□□□ 0.82
SIX3O95343 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.15■□□□□ 0.82
SIX3O95343 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SIX3O95343 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SIX3O95343 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SIX3O95343 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.14■□□□□ 0.81
SIX3O95343 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SIX3O95343 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SIX3O95343 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.14■□□□□ 0.81
SIX3O95343 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
SIX3O95343 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.14■□□□□ 0.81
SIX3O95343 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.14■□□□□ 0.81
SIX3O95343 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SIX3O95343 AC010141.2-201ENST00000452426 721 ntBASIC20.14■□□□□ 0.81
SIX3O95343 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.14■□□□□ 0.81
SIX3O95343 AC104187.1-201ENST00000607510 612 ntBASIC20.14■□□□□ 0.81
SIX3O95343 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SIX3O95343 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SIX3O95343 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.14■□□□□ 0.81
SIX3O95343 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SIX3O95343 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SIX3O95343 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SIX3O95343 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.13■□□□□ 0.81
SIX3O95343 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SIX3O95343 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SIX3O95343 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SIX3O95343 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
SIX3O95343 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
SIX3O95343 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SIX3O95343 MIR935-201ENST00000401179 91 ntBASIC20.13■□□□□ 0.81
SIX3O95343 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SIX3O95343 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.13■□□□□ 0.81
SIX3O95343 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.13■□□□□ 0.81
SIX3O95343 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SIX3O95343 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SIX3O95343 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SIX3O95343 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.13■□□□□ 0.81
SIX3O95343 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.13■□□□□ 0.81
SIX3O95343 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SIX3O95343 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SIX3O95343 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.12■□□□□ 0.81
SIX3O95343 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SIX3O95343 KRT16P2-201ENST00000414673 1423 ntBASIC20.12■□□□□ 0.81
SIX3O95343 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.12■□□□□ 0.81
SIX3O95343 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
SIX3O95343 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.12■□□□□ 0.81
SIX3O95343 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.12■□□□□ 0.81
SIX3O95343 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SIX3O95343 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SIX3O95343 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
SIX3O95343 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.12■□□□□ 0.81
SIX3O95343 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
SIX3O95343 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SIX3O95343 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.12■□□□□ 0.81
SIX3O95343 SLC7A5P2-201ENST00000553010 536 ntBASIC20.12■□□□□ 0.81
SIX3O95343 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.12■□□□□ 0.81
SIX3O95343 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SIX3O95343 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SIX3O95343 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
SIX3O95343 AL121603.2-201ENST00000557373 2117 ntBASIC20.12■□□□□ 0.81
SIX3O95343 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SIX3O95343 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.12■□□□□ 0.81
SIX3O95343 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SIX3O95343 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SIX3O95343 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SIX3O95343 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SIX3O95343 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
SIX3O95343 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.11■□□□□ 0.81
SIX3O95343 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.11■□□□□ 0.81
SIX3O95343 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SIX3O95343 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SIX3O95343 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.11■□□□□ 0.81
SIX3O95343 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
SIX3O95343 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.11■□□□□ 0.81
SIX3O95343 TERF1P2-201ENST00000583350 1212 ntBASIC20.11■□□□□ 0.81
SIX3O95343 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SIX3O95343 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SIX3O95343 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SIX3O95343 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
SIX3O95343 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
SIX3O95343 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SIX3O95343 AL512408.1-201ENST00000569378 2000 ntBASIC20.1■□□□□ 0.81
SIX3O95343 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.1■□□□□ 0.81
SIX3O95343 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SIX3O95343 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.1■□□□□ 0.81
SIX3O95343 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SIX3O95343 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SIX3O95343 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SIX3O95343 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SIX3O95343 AC123595.1-201ENST00000440769 1046 ntBASIC20.1■□□□□ 0.81
SIX3O95343 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.1■□□□□ 0.81
SIX3O95343 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.1■□□□□ 0.81
SIX3O95343 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms