Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM3O75382 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.17■□□□□ 0.66
TRIM3O75382 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM3O75382 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.17■□□□□ 0.66
TRIM3O75382 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.17■□□□□ 0.66
TRIM3O75382 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TRIM3O75382 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.17■□□□□ 0.66
TRIM3O75382 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.17■□□□□ 0.66
TRIM3O75382 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.17■□□□□ 0.66
TRIM3O75382 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM3O75382 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM3O75382 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM3O75382 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM3O75382 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM3O75382 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM3O75382 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM3O75382 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM3O75382 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM3O75382 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM3O75382 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM3O75382 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM3O75382 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM3O75382 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM3O75382 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM3O75382 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM3O75382 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM3O75382 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM3O75382 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM3O75382 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
TRIM3O75382 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.16■□□□□ 0.66
TRIM3O75382 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.16■□□□□ 0.66
TRIM3O75382 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
TRIM3O75382 AC231657.2-201ENST00000624556 255 ntBASIC19.16■□□□□ 0.66
TRIM3O75382 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM3O75382 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM3O75382 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.16■□□□□ 0.66
TRIM3O75382 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.16■□□□□ 0.66
TRIM3O75382 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM3O75382 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
TRIM3O75382 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM3O75382 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRIM3O75382 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM3O75382 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.15■□□□□ 0.66
TRIM3O75382 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM3O75382 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.15■□□□□ 0.66
TRIM3O75382 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM3O75382 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
TRIM3O75382 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.15■□□□□ 0.66
TRIM3O75382 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM3O75382 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM3O75382 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.15■□□□□ 0.66
TRIM3O75382 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
TRIM3O75382 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.15■□□□□ 0.66
TRIM3O75382 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.15■□□□□ 0.66
TRIM3O75382 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.15■□□□□ 0.66
TRIM3O75382 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM3O75382 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
TRIM3O75382 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM3O75382 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM3O75382 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM3O75382 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
TRIM3O75382 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
TRIM3O75382 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM3O75382 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRIM3O75382 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.15■□□□□ 0.66
TRIM3O75382 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
TRIM3O75382 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
TRIM3O75382 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM3O75382 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM3O75382 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM3O75382 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM3O75382 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM3O75382 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
TRIM3O75382 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.14■□□□□ 0.65
TRIM3O75382 CROCCP5-201ENST00000436658 830 ntBASIC19.14■□□□□ 0.65
TRIM3O75382 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.14■□□□□ 0.65
TRIM3O75382 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.14■□□□□ 0.65
TRIM3O75382 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.14■□□□□ 0.65
TRIM3O75382 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRIM3O75382 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
TRIM3O75382 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
TRIM3O75382 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.14■□□□□ 0.65
TRIM3O75382 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
TRIM3O75382 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
TRIM3O75382 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
TRIM3O75382 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
TRIM3O75382 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
TRIM3O75382 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
TRIM3O75382 AC007322.1-201ENST00000426983 750 ntBASIC19.13■□□□□ 0.65
TRIM3O75382 CNN2P6-201ENST00000439038 900 ntBASIC19.13■□□□□ 0.65
TRIM3O75382 TERF1P5-201ENST00000477545 1207 ntBASIC19.13■□□□□ 0.65
TRIM3O75382 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.13■□□□□ 0.65
TRIM3O75382 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.13■□□□□ 0.65
TRIM3O75382 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.13■□□□□ 0.65
TRIM3O75382 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.13■□□□□ 0.65
TRIM3O75382 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM3O75382 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM3O75382 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM3O75382 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRIM3O75382 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms