Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.37■□□□□ 0.69
TRBV5-3A0A0A0MS03 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV5-3A0A0A0MS03 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV5-3A0A0A0MS03 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV5-3A0A0A0MS03 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.37■□□□□ 0.69
TRBV5-3A0A0A0MS03 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV5-3A0A0A0MS03 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.37■□□□□ 0.69
TRBV5-3A0A0A0MS03 AL354811.1-201ENST00000610286 706 ntBASIC19.37■□□□□ 0.69
TRBV5-3A0A0A0MS03 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.37■□□□□ 0.69
TRBV5-3A0A0A0MS03 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV5-3A0A0A0MS03 TCF3P1-201ENST00000423021 1937 ntBASIC19.37■□□□□ 0.69
TRBV5-3A0A0A0MS03 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRBV5-3A0A0A0MS03 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.36■□□□□ 0.69
TRBV5-3A0A0A0MS03 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV5-3A0A0A0MS03 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
TRBV5-3A0A0A0MS03 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.36■□□□□ 0.69
TRBV5-3A0A0A0MS03 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV5-3A0A0A0MS03 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
TRBV5-3A0A0A0MS03 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV5-3A0A0A0MS03 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV5-3A0A0A0MS03 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.36■□□□□ 0.69
TRBV5-3A0A0A0MS03 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.36■□□□□ 0.69
TRBV5-3A0A0A0MS03 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.36■□□□□ 0.69
TRBV5-3A0A0A0MS03 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV5-3A0A0A0MS03 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV5-3A0A0A0MS03 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV5-3A0A0A0MS03 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV5-3A0A0A0MS03 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
TRBV5-3A0A0A0MS03 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV5-3A0A0A0MS03 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRBV5-3A0A0A0MS03 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
TRBV5-3A0A0A0MS03 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRBV5-3A0A0A0MS03 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRBV5-3A0A0A0MS03 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
TRBV5-3A0A0A0MS03 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRBV5-3A0A0A0MS03 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.35■□□□□ 0.69
TRBV5-3A0A0A0MS03 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.35■□□□□ 0.69
TRBV5-3A0A0A0MS03 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRBV5-3A0A0A0MS03 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
TRBV5-3A0A0A0MS03 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRBV5-3A0A0A0MS03 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.35■□□□□ 0.69
TRBV5-3A0A0A0MS03 AC008175.2-201ENST00000612840 297 ntBASIC19.35■□□□□ 0.69
TRBV5-3A0A0A0MS03 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.35■□□□□ 0.69
TRBV5-3A0A0A0MS03 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRBV5-3A0A0A0MS03 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRBV5-3A0A0A0MS03 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRBV5-3A0A0A0MS03 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.35■□□□□ 0.69
TRBV5-3A0A0A0MS03 KRT87P-202ENST00000534226 1464 ntBASIC19.35■□□□□ 0.69
TRBV5-3A0A0A0MS03 KRT16P2-201ENST00000414673 1423 ntBASIC19.34■□□□□ 0.69
TRBV5-3A0A0A0MS03 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRBV5-3A0A0A0MS03 AC008406.3-201ENST00000620001 1374 ntBASIC19.34■□□□□ 0.69
TRBV5-3A0A0A0MS03 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRBV5-3A0A0A0MS03 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.34■□□□□ 0.69
TRBV5-3A0A0A0MS03 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRBV5-3A0A0A0MS03 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRBV5-3A0A0A0MS03 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.34■□□□□ 0.69
TRBV5-3A0A0A0MS03 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
TRBV5-3A0A0A0MS03 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRBV5-3A0A0A0MS03 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
TRBV5-3A0A0A0MS03 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRBV5-3A0A0A0MS03 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
TRBV5-3A0A0A0MS03 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.34■□□□□ 0.69
TRBV5-3A0A0A0MS03 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRBV5-3A0A0A0MS03 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRBV5-3A0A0A0MS03 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.34■□□□□ 0.69
TRBV5-3A0A0A0MS03 AC138907.5-202ENST00000569484 235 ntBASIC19.34■□□□□ 0.69
TRBV5-3A0A0A0MS03 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
TRBV5-3A0A0A0MS03 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRBV5-3A0A0A0MS03 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRBV5-3A0A0A0MS03 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.34■□□□□ 0.69
TRBV5-3A0A0A0MS03 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRBV5-3A0A0A0MS03 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TRBV5-3A0A0A0MS03 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
TRBV5-3A0A0A0MS03 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TRBV5-3A0A0A0MS03 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.33■□□□□ 0.68
TRBV5-3A0A0A0MS03 SUDS3P1-201ENST00000505831 966 ntBASIC19.33■□□□□ 0.68
TRBV5-3A0A0A0MS03 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.33■□□□□ 0.68
TRBV5-3A0A0A0MS03 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRBV5-3A0A0A0MS03 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRBV5-3A0A0A0MS03 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRBV5-3A0A0A0MS03 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.33■□□□□ 0.68
TRBV5-3A0A0A0MS03 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TRBV5-3A0A0A0MS03 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRBV5-3A0A0A0MS03 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.32■□□□□ 0.68
TRBV5-3A0A0A0MS03 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRBV5-3A0A0A0MS03 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRBV5-3A0A0A0MS03 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.32■□□□□ 0.68
TRBV5-3A0A0A0MS03 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRBV5-3A0A0A0MS03 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
TRBV5-3A0A0A0MS03 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRBV5-3A0A0A0MS03 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRBV5-3A0A0A0MS03 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRBV5-3A0A0A0MS03 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRBV5-3A0A0A0MS03 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.32■□□□□ 0.68
TRBV5-3A0A0A0MS03 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRBV5-3A0A0A0MS03 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRBV5-3A0A0A0MS03 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.32■□□□□ 0.68
TRBV5-3A0A0A0MS03 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRBV5-3A0A0A0MS03 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.32■□□□□ 0.68
TRBV5-3A0A0A0MS03 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms