Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 PTPRB-204ENST00000538708 5839 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
SNX18Q96RF0 ABL2-206ENST00000504405 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
SNX18Q96RF0 ZNF791-202ENST00000446165 6412 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
SNX18Q96RF0 LRRC52-201ENST00000294818 1369 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
SNX18Q96RF0 ZNF550-206ENST00000506609 1361 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
SNX18Q96RF0 PASD1-201ENST00000370357 3163 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
SNX18Q96RF0 TCAF1-201ENST00000355951 3343 ntAPPRIS ALT1 TSL 1 (best) BASIC8.76□□□□□ -1.01
SNX18Q96RF0 WDR11-AS1-203ENST00000598981 2242 ntTSL 5 BASIC8.76□□□□□ -1.01
SNX18Q96RF0 SLC25A14-214ENST00000545805 1650 ntTSL 5 BASIC8.76□□□□□ -1.01
SNX18Q96RF0 DAZ2-207ENST00000382449 3791 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
SNX18Q96RF0 LOXHD1-212ENST00000582408 3755 ntTSL 2 BASIC8.76□□□□□ -1.01
SNX18Q96RF0 ZNF471-202ENST00000591537 5859 ntTSL 2 BASIC8.76□□□□□ -1.01
SNX18Q96RF0 SLC9B2-204ENST00000503230 1826 ntTSL 2 BASIC8.76□□□□□ -1.01
SNX18Q96RF0 ARHGEF9-234ENST00000637557 4775 ntTSL 5 BASIC8.76□□□□□ -1.01
SNX18Q96RF0 TCF4-224ENST00000564403 2696 ntAPPRIS ALT1 TSL 5 BASIC8.76□□□□□ -1.01
SNX18Q96RF0 RARRES3-201ENST00000255688 749 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
SNX18Q96RF0 OBP2A-201ENST00000340780 741 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
SNX18Q96RF0 PDZD11-202ENST00000374454 784 ntAPPRIS P1 TSL 2 BASIC8.76□□□□□ -1.01
SNX18Q96RF0 FKBP1A-202ENST00000381719 747 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
SNX18Q96RF0 REG3A-202ENST00000393878 1095 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
SNX18Q96RF0 AL360268.2-201ENST00000414976 380 ntTSL 3 BASIC8.76□□□□□ -1.01
SNX18Q96RF0 LINC02087-201ENST00000418821 951 ntTSL 2 BASIC8.76□□□□□ -1.01
SNX18Q96RF0 ZDHHC11-202ENST00000424784 943 ntTSL 5 BASIC8.76□□□□□ -1.01
SNX18Q96RF0 IMP3P1-201ENST00000427532 557 ntBASIC8.76□□□□□ -1.01
SNX18Q96RF0 MIR646HG-206ENST00000431181 858 ntTSL 3 BASIC8.76□□□□□ -1.01
SNX18Q96RF0 RN7SL151P-201ENST00000460537 283 ntBASIC8.76□□□□□ -1.01
SNX18Q96RF0 KATNBL1P4-201ENST00000503545 918 ntBASIC8.76□□□□□ -1.01
SNX18Q96RF0 AC104116.1-201ENST00000504539 411 ntTSL 5 BASIC8.76□□□□□ -1.01
SNX18Q96RF0 HGNC:18790-207ENST00000505246 973 ntAPPRIS P1 TSL 3 BASIC8.76□□□□□ -1.01
SNX18Q96RF0 AC022140.1-202ENST00000507887 638 ntTSL 3 BASIC8.76□□□□□ -1.01
SNX18Q96RF0 IGLV3-31-201ENST00000523713 297 ntBASIC8.76□□□□□ -1.01
SNX18Q96RF0 TATDN3-207ENST00000526641 1073 ntTSL 2 BASIC8.76□□□□□ -1.01
SNX18Q96RF0 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC8.76□□□□□ -1.01
SNX18Q96RF0 ETFRF1-203ENST00000554266 429 ntTSL 3 BASIC8.76□□□□□ -1.01
SNX18Q96RF0 LINC01579-203ENST00000555023 400 ntTSL 3 BASIC8.76□□□□□ -1.01
SNX18Q96RF0 AC018563.1-201ENST00000558089 566 ntTSL 4 BASIC8.76□□□□□ -1.01
SNX18Q96RF0 DPPA5P2-201ENST00000561451 299 ntBASIC8.76□□□□□ -1.01
SNX18Q96RF0 AL807752.5-201ENST00000569497 820 ntBASIC8.76□□□□□ -1.01
SNX18Q96RF0 AC137761.1-201ENST00000569859 601 ntTSL 5 BASIC8.76□□□□□ -1.01
SNX18Q96RF0 MIR3911-201ENST00000577791 109 ntBASIC8.76□□□□□ -1.01
SNX18Q96RF0 AC023983.1-201ENST00000579347 567 ntTSL 5 BASIC8.76□□□□□ -1.01
SNX18Q96RF0 RN7SL391P-201ENST00000582559 284 ntBASIC8.76□□□□□ -1.01
SNX18Q96RF0 AP001029.2-201ENST00000586591 361 ntTSL 3 BASIC8.76□□□□□ -1.01
SNX18Q96RF0 AF038458.2-201ENST00000587412 600 ntTSL 3 BASIC8.76□□□□□ -1.01
SNX18Q96RF0 AC006504.5-205ENST00000588318 432 ntTSL 3 BASIC8.76□□□□□ -1.01
SNX18Q96RF0 FAM197Y2-203ENST00000598351 776 ntBASIC8.76□□□□□ -1.01
SNX18Q96RF0 FXYD3-213ENST00000605552 837 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
SNX18Q96RF0 AL357518.1-201ENST00000607169 430 ntBASIC8.76□□□□□ -1.01
SNX18Q96RF0 U47924.3-201ENST00000610699 461 ntBASIC8.76□□□□□ -1.01
SNX18Q96RF0 SAXO2-201ENST00000339465 3134 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
SNX18Q96RF0 NR2C1-202ENST00000333003 4143 ntAPPRIS P1 TSL 2 BASIC8.76□□□□□ -1.01
SNX18Q96RF0 KAT6A-208ENST00000485568 3592 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
SNX18Q96RF0 CPA4-202ENST00000445470 2718 ntTSL 2 BASIC8.76□□□□□ -1.01
SNX18Q96RF0 ARNTL2-207ENST00000542388 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
SNX18Q96RF0 PRR27-202ENST00000502294 3007 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
SNX18Q96RF0 CDH26-202ENST00000348616 3182 ntAPPRIS P1 TSL 2 BASIC8.76□□□□□ -1.01
SNX18Q96RF0 SORBS2-204ENST00000355634 4622 ntAPPRIS P1 TSL 2 BASIC8.76□□□□□ -1.01
SNX18Q96RF0 TCF7L2-221ENST00000545257 2160 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
SNX18Q96RF0 CSMD2-205ENST00000373381 13698 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
SNX18Q96RF0 SCML2-201ENST00000251900 4200 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
SNX18Q96RF0 SYT1-202ENST00000393240 3095 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
SNX18Q96RF0 NBPF7-201ENST00000445758 1326 ntBASIC8.76□□□□□ -1.01
SNX18Q96RF0 FLT1P1-201ENST00000451650 1320 ntBASIC8.76□□□□□ -1.01
SNX18Q96RF0 PTPN20-225ENST00000511769 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
SNX18Q96RF0 NUDT21-201ENST00000300291 4436 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
SNX18Q96RF0 PPHLN1-203ENST00000337898 1465 ntTSL 2 BASIC8.76□□□□□ -1.01
SNX18Q96RF0 DERA-204ENST00000526530 1619 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
SNX18Q96RF0 ERICH6-203ENST00000491361 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
SNX18Q96RF0 HNRNPC-208ENST00000553753 1790 ntTSL 5 BASIC8.76□□□□□ -1.01
SNX18Q96RF0 CYFIP2-209ENST00000521420 6370 ntTSL 2 BASIC8.76□□□□□ -1.01
SNX18Q96RF0 BTK-202ENST00000372880 2248 ntTSL 2 BASIC8.76□□□□□ -1.01
SNX18Q96RF0 SVOP-205ENST00000610966 6813 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
SNX18Q96RF0 ZNF615-202ENST00000391795 2698 ntTSL 2 BASIC8.76□□□□□ -1.01
SNX18Q96RF0 ZEB2-229ENST00000629520 2564 ntTSL 2 BASIC8.75□□□□□ -1.01
SNX18Q96RF0 ZNF433-201ENST00000344980 2280 ntAPPRIS P1 TSL 2 BASIC8.75□□□□□ -1.01
SNX18Q96RF0 OXNAD1-207ENST00000606098 2288 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
SNX18Q96RF0 ZNF442-201ENST00000242804 6219 ntAPPRIS P1 TSL 2 BASIC8.75□□□□□ -1.01
SNX18Q96RF0 SCN8A-203ENST00000545061 11433 ntTSL 5 BASIC8.75□□□□□ -1.01
SNX18Q96RF0 AC074194.2-201ENST00000636429 2348 ntBASIC8.75□□□□□ -1.01
SNX18Q96RF0 MIR4435-2HG-202ENST00000371162 2044 ntBASIC8.75□□□□□ -1.01
SNX18Q96RF0 MUC22-201ENST00000561890 6019 ntAPPRIS P1 TSL 2 BASIC8.75□□□□□ -1.01
SNX18Q96RF0 SUMO2-201ENST00000314523 809 ntTSL 2 BASIC8.75□□□□□ -1.01
SNX18Q96RF0 OR6T1-201ENST00000321252 1089 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
SNX18Q96RF0 MT1B-201ENST00000334346 380 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
SNX18Q96RF0 MIR370-201ENST00000362135 75 ntBASIC8.75□□□□□ -1.01
SNX18Q96RF0 AGPAT4-202ENST00000366905 942 ntTSL 2 BASIC8.75□□□□□ -1.01
SNX18Q96RF0 CYP17A1-AS1-201ENST00000369884 491 ntTSL 2 BASIC8.75□□□□□ -1.01
SNX18Q96RF0 FXYD5-202ENST00000392217 632 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
SNX18Q96RF0 CCR3-203ENST00000395942 1201 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
SNX18Q96RF0 LDHAP7-201ENST00000398295 965 ntBASIC8.75□□□□□ -1.01
SNX18Q96RF0 RN7SKP172-201ENST00000411341 298 ntBASIC8.75□□□□□ -1.01
SNX18Q96RF0 AL139184.1-201ENST00000426579 364 ntTSL 3 BASIC8.75□□□□□ -1.01
SNX18Q96RF0 AL358176.4-201ENST00000428891 675 ntTSL 2 BASIC8.75□□□□□ -1.01
SNX18Q96RF0 LANCL1-203ENST00000431941 1270 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
SNX18Q96RF0 TUBB4BP3-201ENST00000437546 271 ntBASIC8.75□□□□□ -1.01
SNX18Q96RF0 LINC00843-202ENST00000444438 550 ntTSL 5 BASIC8.75□□□□□ -1.01
SNX18Q96RF0 AC007272.1-201ENST00000448256 1269 ntTSL 5 BASIC8.75□□□□□ -1.01
SNX18Q96RF0 C1QTNF9-AS1-201ENST00000449656 470 ntTSL 5 BASIC8.75□□□□□ -1.01
SNX18Q96RF0 AC005020.1-201ENST00000455459 526 ntBASIC8.75□□□□□ -1.01
SNX18Q96RF0 RN7SL461P-201ENST00000484915 282 ntBASIC8.75□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms