Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 ENTPD1-AS1-209ENST00000452728 858 ntTSL 3 BASIC8.86□□□□□ -0.99
SNX18Q96RF0 FDPSP2-201ENST00000453932 897 ntBASIC8.86□□□□□ -0.99
SNX18Q96RF0 FBXL2-221ENST00000507198 1259 ntTSL 2 BASIC8.86□□□□□ -0.99
SNX18Q96RF0 LINC02147-202ENST00000509669 637 ntTSL 3 BASIC8.86□□□□□ -0.99
SNX18Q96RF0 RNA5SP444-201ENST00000516844 106 ntBASIC8.86□□□□□ -0.99
SNX18Q96RF0 AP001453.2-202ENST00000538355 431 ntTSL 2 BASIC8.86□□□□□ -0.99
SNX18Q96RF0 AC117498.1-201ENST00000548742 713 ntTSL 2 BASIC8.86□□□□□ -0.99
SNX18Q96RF0 PRSS58-202ENST00000552471 1123 ntAPPRIS P1 TSL 2 BASIC8.86□□□□□ -0.99
SNX18Q96RF0 PSMA6-211ENST00000555764 1002 ntTSL 2 BASIC8.86□□□□□ -0.99
SNX18Q96RF0 LINC00524-201ENST00000556987 418 ntTSL 3 BASIC8.86□□□□□ -0.99
SNX18Q96RF0 AC090515.5-201ENST00000560378 526 ntTSL 5 BASIC8.86□□□□□ -0.99
SNX18Q96RF0 SNX11-206ENST00000580219 1200 ntTSL 2 BASIC8.86□□□□□ -0.99
SNX18Q96RF0 AC007922.1-201ENST00000583122 459 ntTSL 2 BASIC8.86□□□□□ -0.99
SNX18Q96RF0 FAAP24-205ENST00000590281 865 ntAPPRIS P1 TSL 3 BASIC8.86□□□□□ -0.99
SNX18Q96RF0 AC091544.6-201ENST00000607766 446 ntTSL 5 BASIC8.86□□□□□ -0.99
SNX18Q96RF0 FAM122B-208ENST00000611027 1059 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
SNX18Q96RF0 Metazoa_SRP.41-201ENST00000614637 258 ntBASIC8.86□□□□□ -0.99
SNX18Q96RF0 AP000787.3-201ENST00000634407 307 ntBASIC8.86□□□□□ -0.99
SNX18Q96RF0 AL669831.3-201ENST00000634833 906 ntTSL 5 BASIC8.86□□□□□ -0.99
SNX18Q96RF0 ARG1-207ENST00000640973 708 ntTSL 5 BASIC8.86□□□□□ -0.99
SNX18Q96RF0 TSC1-208ENST00000545250 8310 ntTSL 5 BASIC8.86□□□□□ -0.99
SNX18Q96RF0 MSL3-202ENST00000337339 3446 ntTSL 2 BASIC8.86□□□□□ -0.99
SNX18Q96RF0 FRMD6-201ENST00000344768 2972 ntTSL 2 BASIC8.86□□□□□ -0.99
SNX18Q96RF0 FLNB-AS1-202ENST00000488720 3709 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
SNX18Q96RF0 MCF2L2-203ENST00000447025 2394 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
SNX18Q96RF0 MAGED1-204ENST00000375772 2701 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
SNX18Q96RF0 SLAMF7-206ENST00000458104 2345 ntTSL 2 BASIC8.86□□□□□ -0.99
SNX18Q96RF0 PPP2R5D-203ENST00000461010 1558 ntAPPRIS ALT1 TSL 1 (best) BASIC8.86□□□□□ -0.99
SNX18Q96RF0 GABRP-206ENST00000519385 1567 ntTSL 2 BASIC8.86□□□□□ -0.99
SNX18Q96RF0 SRGAP2B-204ENST00000612199 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
SNX18Q96RF0 AC016722.3-201ENST00000568862 2463 ntBASIC8.86□□□□□ -0.99
SNX18Q96RF0 TPD52L3-202ENST00000344545 2296 ntAPPRIS P4 BASIC8.85□□□□□ -0.99
SNX18Q96RF0 FSD1L-207ENST00000484973 1711 ntAPPRIS P1 TSL 2 BASIC8.85□□□□□ -0.99
SNX18Q96RF0 LINC00402-201ENST00000419499 3340 ntTSL 2 BASIC8.85□□□□□ -0.99
SNX18Q96RF0 COA1-203ENST00000395879 2448 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
SNX18Q96RF0 AC011815.1-201ENST00000586922 4382 ntTSL 2 BASIC8.85□□□□□ -0.99
SNX18Q96RF0 PCAT18-201ENST00000579458 2598 ntTSL 2 BASIC8.85□□□□□ -0.99
SNX18Q96RF0 VTA1-205ENST00000620996 3272 ntTSL 3 BASIC8.85□□□□□ -0.99
SNX18Q96RF0 UTY-201ENST00000329134 4325 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
SNX18Q96RF0 TPM3-207ENST00000341372 2007 ntTSL 5 BASIC8.85□□□□□ -0.99
SNX18Q96RF0 NONO-201ENST00000276079 2713 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
SNX18Q96RF0 SZRD1-210ENST00000492354 3401 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
SNX18Q96RF0 C2orf49-201ENST00000258457 4768 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
SNX18Q96RF0 MYF6-201ENST00000228641 1465 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
SNX18Q96RF0 TMEM196-202ENST00000405844 4054 ntTSL 5 BASIC8.85□□□□□ -0.99
SNX18Q96RF0 LMCD1-AS1-203ENST00000441861 2683 ntTSL 2 BASIC8.85□□□□□ -0.99
SNX18Q96RF0 NFIB-218ENST00000636432 1953 ntTSL 5 BASIC8.85□□□□□ -0.99
SNX18Q96RF0 KBTBD4-201ENST00000395288 2460 ntAPPRIS P1 TSL 2 BASIC8.85□□□□□ -0.99
SNX18Q96RF0 OR7C1-201ENST00000248073 1066 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
SNX18Q96RF0 PILRA-203ENST00000394000 909 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
SNX18Q96RF0 NMNAT1-202ENST00000403197 1094 ntTSL 2 BASIC8.85□□□□□ -0.99
SNX18Q96RF0 ALKAL2-205ENST00000405290 558 ntTSL 2 BASIC8.85□□□□□ -0.99
SNX18Q96RF0 TM2D3-203ENST00000428002 1267 ntTSL 2 BASIC8.85□□□□□ -0.99
SNX18Q96RF0 AC092810.1-201ENST00000429208 1224 ntBASIC8.85□□□□□ -0.99
SNX18Q96RF0 FTLP4-201ENST00000430740 493 ntBASIC8.85□□□□□ -0.99
SNX18Q96RF0 ZNF175-202ENST00000436511 488 ntTSL 2 BASIC8.85□□□□□ -0.99
SNX18Q96RF0 AC034187.1-201ENST00000437047 561 ntTSL 4 BASIC8.85□□□□□ -0.99
SNX18Q96RF0 KCNMB2-AS1-204ENST00000437488 964 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
SNX18Q96RF0 AL451062.1-201ENST00000437753 469 ntTSL 2 BASIC8.85□□□□□ -0.99
SNX18Q96RF0 PHKG1P1-201ENST00000442924 614 ntBASIC8.85□□□□□ -0.99
SNX18Q96RF0 AL359873.1-201ENST00000447908 764 ntTSL 3 BASIC8.85□□□□□ -0.99
SNX18Q96RF0 AL391883.1-201ENST00000454736 447 ntTSL 2 BASIC8.85□□□□□ -0.99
SNX18Q96RF0 AL121929.1-201ENST00000457120 524 ntTSL 3 BASIC8.85□□□□□ -0.99
SNX18Q96RF0 SSR3-205ENST00000467789 1039 ntTSL 2 BASIC8.85□□□□□ -0.99
SNX18Q96RF0 LINC02004-201ENST00000482019 294 ntTSL 2 BASIC8.85□□□□□ -0.99
SNX18Q96RF0 AC010181.2-201ENST00000483759 482 ntTSL 3 BASIC8.85□□□□□ -0.99
SNX18Q96RF0 FBXL2-216ENST00000484457 3847 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
SNX18Q96RF0 AC097460.1-202ENST00000507494 769 ntTSL 5 BASIC8.85□□□□□ -0.99
SNX18Q96RF0 AC097535.2-201ENST00000507715 142 ntBASIC8.85□□□□□ -0.99
SNX18Q96RF0 IGHV1-67-201ENST00000519713 357 ntBASIC8.85□□□□□ -0.99
SNX18Q96RF0 AC105031.2-201ENST00000522123 814 ntTSL 3 BASIC8.85□□□□□ -0.99
SNX18Q96RF0 NPIPA3-201ENST00000526520 954 ntTSL 5 BASIC8.85□□□□□ -0.99
SNX18Q96RF0 NPIPA2-201ENST00000529166 1110 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
SNX18Q96RF0 NPIPA2-202ENST00000530328 954 ntTSL 5 BASIC8.85□□□□□ -0.99
SNX18Q96RF0 AP003392.1-201ENST00000531087 523 ntTSL 5 BASIC8.85□□□□□ -0.99
SNX18Q96RF0 NPIPA3-202ENST00000531598 1155 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
SNX18Q96RF0 NPIPA5-202ENST00000534094 954 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
SNX18Q96RF0 FCF1-202ENST00000534938 794 ntTSL 3 BASIC8.85□□□□□ -0.99
SNX18Q96RF0 PPP2R5C-212ENST00000554442 800 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
SNX18Q96RF0 AC136944.3-201ENST00000568520 554 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
SNX18Q96RF0 MAGOH2P-201ENST00000580926 436 ntBASIC8.85□□□□□ -0.99
SNX18Q96RF0 AC239859.4-201ENST00000582255 675 ntBASIC8.85□□□□□ -0.99
SNX18Q96RF0 AP005482.3-201ENST00000585877 720 ntBASIC8.85□□□□□ -0.99
SNX18Q96RF0 RIT2-203ENST00000590910 870 ntTSL 5 BASIC8.85□□□□□ -0.99
SNX18Q96RF0 AC010636.2-201ENST00000595094 522 ntTSL 5 BASIC8.85□□□□□ -0.99
SNX18Q96RF0 TEX101-201ENST00000598265 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
SNX18Q96RF0 AC124076.1-201ENST00000611470 608 ntBASIC8.85□□□□□ -0.99
SNX18Q96RF0 MIR7848-201ENST00000617402 101 ntBASIC8.85□□□□□ -0.99
SNX18Q96RF0 AC092653.2-201ENST00000624373 513 ntBASIC8.85□□□□□ -0.99
SNX18Q96RF0 AL356585.1-201ENST00000624447 897 ntBASIC8.85□□□□□ -0.99
SNX18Q96RF0 LINC01943-201ENST00000625410 559 ntTSL 2 BASIC8.85□□□□□ -0.99
SNX18Q96RF0 PARP9-205ENST00000477522 3128 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
SNX18Q96RF0 NDUFB4-203ENST00000485064 1426 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
SNX18Q96RF0 PABPC4L-201ENST00000421491 4944 ntAPPRIS P1 TSL 3 BASIC8.85□□□□□ -0.99
SNX18Q96RF0 EPC1-202ENST00000319778 4057 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
SNX18Q96RF0 LINC01662-202ENST00000611876 1559 ntBASIC8.85□□□□□ -0.99
SNX18Q96RF0 MYO1E-201ENST00000288235 8673 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
SNX18Q96RF0 POP4-202ENST00000585603 3385 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
SNX18Q96RF0 EIF1AD-201ENST00000312234 2887 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
SNX18Q96RF0 ABCC2-201ENST00000370434 1714 ntTSL 2 BASIC8.85□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms