Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CLIC4Q9Y696 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
CLIC4Q9Y696 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
CLIC4Q9Y696 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
CLIC4Q9Y696 KRT16P2-201ENST00000414673 1423 ntBASIC23.61■■□□□ 1.37
CLIC4Q9Y696 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC23.61■■□□□ 1.37
CLIC4Q9Y696 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
CLIC4Q9Y696 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CLIC4Q9Y696 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
CLIC4Q9Y696 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC23.61■■□□□ 1.37
CLIC4Q9Y696 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CLIC4Q9Y696 KRT18P14-201ENST00000534205 1250 ntBASIC23.61■■□□□ 1.37
CLIC4Q9Y696 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CLIC4Q9Y696 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CLIC4Q9Y696 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
CLIC4Q9Y696 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC23.6■■□□□ 1.37
CLIC4Q9Y696 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
CLIC4Q9Y696 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CLIC4Q9Y696 AC004854.2-201ENST00000608450 1441 ntBASIC23.6■■□□□ 1.37
CLIC4Q9Y696 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC23.6■■□□□ 1.37
CLIC4Q9Y696 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC23.6■■□□□ 1.37
CLIC4Q9Y696 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC23.6■■□□□ 1.37
CLIC4Q9Y696 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC23.6■■□□□ 1.37
CLIC4Q9Y696 DUX4L2-201ENST00000561772 1275 ntBASIC23.6■■□□□ 1.37
CLIC4Q9Y696 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC23.6■■□□□ 1.37
CLIC4Q9Y696 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC23.6■■□□□ 1.37
CLIC4Q9Y696 DUX4L6-201ENST00000626483 1275 ntBASIC23.6■■□□□ 1.37
CLIC4Q9Y696 DUX4L1-201ENST00000627662 1275 ntBASIC23.6■■□□□ 1.37
CLIC4Q9Y696 DUX4L8-201ENST00000629013 1275 ntBASIC23.6■■□□□ 1.37
CLIC4Q9Y696 DUX4L3-201ENST00000630187 1275 ntBASIC23.6■■□□□ 1.37
CLIC4Q9Y696 DUX4L7-201ENST00000630678 1275 ntBASIC23.6■■□□□ 1.37
CLIC4Q9Y696 DUX4L5-201ENST00000630834 1275 ntBASIC23.6■■□□□ 1.37
CLIC4Q9Y696 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CLIC4Q9Y696 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CLIC4Q9Y696 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CLIC4Q9Y696 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
CLIC4Q9Y696 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CLIC4Q9Y696 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC23.59■■□□□ 1.37
CLIC4Q9Y696 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
CLIC4Q9Y696 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CLIC4Q9Y696 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC23.59■■□□□ 1.37
CLIC4Q9Y696 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
CLIC4Q9Y696 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CLIC4Q9Y696 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
CLIC4Q9Y696 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
CLIC4Q9Y696 COX20-201ENST00000366528 568 ntTSL 2 BASIC23.59■■□□□ 1.37
CLIC4Q9Y696 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CLIC4Q9Y696 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC23.59■■□□□ 1.37
CLIC4Q9Y696 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC23.59■■□□□ 1.37
CLIC4Q9Y696 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC23.59■■□□□ 1.37
CLIC4Q9Y696 KRT18P61-201ENST00000585825 1298 ntBASIC23.59■■□□□ 1.37
CLIC4Q9Y696 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC23.59■■□□□ 1.37
CLIC4Q9Y696 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CLIC4Q9Y696 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC23.59■■□□□ 1.37
CLIC4Q9Y696 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
CLIC4Q9Y696 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CLIC4Q9Y696 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CLIC4Q9Y696 AC020907.5-201ENST00000624372 1936 ntBASIC23.59■■□□□ 1.37
CLIC4Q9Y696 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
CLIC4Q9Y696 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC23.58■■□□□ 1.37
CLIC4Q9Y696 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
CLIC4Q9Y696 AL391422.3-201ENST00000603791 2761 ntBASIC23.58■■□□□ 1.37
CLIC4Q9Y696 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC23.58■■□□□ 1.37
CLIC4Q9Y696 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CLIC4Q9Y696 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CLIC4Q9Y696 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC23.58■■□□□ 1.37
CLIC4Q9Y696 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC23.58■■□□□ 1.37
CLIC4Q9Y696 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC23.58■■□□□ 1.37
CLIC4Q9Y696 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CLIC4Q9Y696 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC23.58■■□□□ 1.37
CLIC4Q9Y696 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC23.58■■□□□ 1.37
CLIC4Q9Y696 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC23.58■■□□□ 1.37
CLIC4Q9Y696 AL121603.2-201ENST00000557373 2117 ntBASIC23.58■■□□□ 1.37
CLIC4Q9Y696 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC23.58■■□□□ 1.37
CLIC4Q9Y696 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CLIC4Q9Y696 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC23.58■■□□□ 1.37
CLIC4Q9Y696 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
CLIC4Q9Y696 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC23.58■■□□□ 1.36
CLIC4Q9Y696 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.36
CLIC4Q9Y696 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC23.57■■□□□ 1.36
CLIC4Q9Y696 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CLIC4Q9Y696 TESC-206ENST00000541210 936 ntTSL 3 BASIC23.57■■□□□ 1.36
CLIC4Q9Y696 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CLIC4Q9Y696 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CLIC4Q9Y696 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CLIC4Q9Y696 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
CLIC4Q9Y696 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CLIC4Q9Y696 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CLIC4Q9Y696 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
CLIC4Q9Y696 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CLIC4Q9Y696 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CLIC4Q9Y696 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC23.56■■□□□ 1.36
CLIC4Q9Y696 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CLIC4Q9Y696 STAC-204ENST00000457375 1366 ntTSL 2 BASIC23.56■■□□□ 1.36
CLIC4Q9Y696 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CLIC4Q9Y696 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CLIC4Q9Y696 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
CLIC4Q9Y696 GUK1-205ENST00000366722 850 ntTSL 3 BASIC23.56■■□□□ 1.36
CLIC4Q9Y696 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CLIC4Q9Y696 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms