Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC32.16■■■□□ 2.74
CDK11AQ9UQ88 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC32.15■■■□□ 2.74
CDK11AQ9UQ88 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
CDK11AQ9UQ88 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC32.15■■■□□ 2.74
CDK11AQ9UQ88 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC32.15■■■□□ 2.74
CDK11AQ9UQ88 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
CDK11AQ9UQ88 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
CDK11AQ9UQ88 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
CDK11AQ9UQ88 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC32.15■■■□□ 2.74
CDK11AQ9UQ88 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC32.14■■■□□ 2.74
CDK11AQ9UQ88 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC32.14■■■□□ 2.74
CDK11AQ9UQ88 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC32.14■■■□□ 2.74
CDK11AQ9UQ88 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC32.14■■■□□ 2.74
CDK11AQ9UQ88 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
CDK11AQ9UQ88 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
CDK11AQ9UQ88 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC32.14■■■□□ 2.74
CDK11AQ9UQ88 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC32.14■■■□□ 2.74
CDK11AQ9UQ88 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC32.14■■■□□ 2.74
CDK11AQ9UQ88 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.73
CDK11AQ9UQ88 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC32.14■■■□□ 2.73
CDK11AQ9UQ88 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
CDK11AQ9UQ88 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC32.13■■■□□ 2.73
CDK11AQ9UQ88 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC32.13■■■□□ 2.73
CDK11AQ9UQ88 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC32.13■■■□□ 2.73
CDK11AQ9UQ88 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC32.13■■■□□ 2.73
CDK11AQ9UQ88 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC32.13■■■□□ 2.73
CDK11AQ9UQ88 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
CDK11AQ9UQ88 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC32.12■■■□□ 2.73
CDK11AQ9UQ88 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
CDK11AQ9UQ88 AC087633.2-202ENST00000565166 1439 ntBASIC32.12■■■□□ 2.73
CDK11AQ9UQ88 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC32.12■■■□□ 2.73
CDK11AQ9UQ88 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
CDK11AQ9UQ88 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
CDK11AQ9UQ88 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC32.12■■■□□ 2.73
CDK11AQ9UQ88 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC32.12■■■□□ 2.73
CDK11AQ9UQ88 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC32.12■■■□□ 2.73
CDK11AQ9UQ88 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC32.12■■■□□ 2.73
CDK11AQ9UQ88 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
CDK11AQ9UQ88 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
CDK11AQ9UQ88 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC32.11■■■□□ 2.73
CDK11AQ9UQ88 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
CDK11AQ9UQ88 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC32.11■■■□□ 2.73
CDK11AQ9UQ88 AC073912.3-201ENST00000624414 853 ntBASIC32.11■■■□□ 2.73
CDK11AQ9UQ88 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
CDK11AQ9UQ88 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
CDK11AQ9UQ88 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC32.1■■■□□ 2.73
CDK11AQ9UQ88 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
CDK11AQ9UQ88 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC32.1■■■□□ 2.73
CDK11AQ9UQ88 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
CDK11AQ9UQ88 ISG20-202ENST00000379224 540 ntTSL 3 BASIC32.1■■■□□ 2.73
CDK11AQ9UQ88 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
CDK11AQ9UQ88 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC32.1■■■□□ 2.73
CDK11AQ9UQ88 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC32.1■■■□□ 2.73
CDK11AQ9UQ88 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC32.1■■■□□ 2.73
CDK11AQ9UQ88 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC32.1■■■□□ 2.73
CDK11AQ9UQ88 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC32.1■■■□□ 2.73
CDK11AQ9UQ88 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC32.09■■■□□ 2.73
CDK11AQ9UQ88 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
CDK11AQ9UQ88 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
CDK11AQ9UQ88 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
CDK11AQ9UQ88 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC32.09■■■□□ 2.73
CDK11AQ9UQ88 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC32.09■■■□□ 2.73
CDK11AQ9UQ88 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
CDK11AQ9UQ88 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC32.09■■■□□ 2.73
CDK11AQ9UQ88 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC32.09■■■□□ 2.73
CDK11AQ9UQ88 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC32.09■■■□□ 2.73
CDK11AQ9UQ88 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC32.09■■■□□ 2.73
CDK11AQ9UQ88 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC32.08■■■□□ 2.73
CDK11AQ9UQ88 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
CDK11AQ9UQ88 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC32.08■■■□□ 2.73
CDK11AQ9UQ88 SNORA78-201ENST00000459373 127 ntBASIC32.08■■■□□ 2.73
CDK11AQ9UQ88 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC32.08■■■□□ 2.73
CDK11AQ9UQ88 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC32.08■■■□□ 2.73
CDK11AQ9UQ88 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
CDK11AQ9UQ88 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC32.08■■■□□ 2.73
CDK11AQ9UQ88 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
CDK11AQ9UQ88 GGT1-206ENST00000404223 952 ntTSL 2 BASIC32.07■■■□□ 2.72
CDK11AQ9UQ88 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
CDK11AQ9UQ88 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
CDK11AQ9UQ88 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
CDK11AQ9UQ88 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC32.07■■■□□ 2.72
CDK11AQ9UQ88 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
CDK11AQ9UQ88 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC32.06■■■□□ 2.72
CDK11AQ9UQ88 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC32.06■■■□□ 2.72
CDK11AQ9UQ88 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC32.06■■■□□ 2.72
CDK11AQ9UQ88 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
CDK11AQ9UQ88 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC32.06■■■□□ 2.72
CDK11AQ9UQ88 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
CDK11AQ9UQ88 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC32.05■■■□□ 2.72
CDK11AQ9UQ88 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC32.05■■■□□ 2.72
CDK11AQ9UQ88 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC32.05■■■□□ 2.72
CDK11AQ9UQ88 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
CDK11AQ9UQ88 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC32.05■■■□□ 2.72
CDK11AQ9UQ88 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
CDK11AQ9UQ88 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
CDK11AQ9UQ88 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC32.05■■■□□ 2.72
CDK11AQ9UQ88 PGM5P4-201ENST00000421970 445 ntBASIC32.05■■■□□ 2.72
CDK11AQ9UQ88 AC012618.2-201ENST00000428058 849 ntBASIC32.05■■■□□ 2.72
CDK11AQ9UQ88 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC32.05■■■□□ 2.72
CDK11AQ9UQ88 GXYLT1P3-201ENST00000453058 1193 ntBASIC32.05■■■□□ 2.72
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms