Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.98■□□□□ 0.63
LRFN1Q9P244 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LRFN1Q9P244 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRFN1Q9P244 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.98■□□□□ 0.63
LRFN1Q9P244 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRFN1Q9P244 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRFN1Q9P244 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRFN1Q9P244 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
LRFN1Q9P244 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRFN1Q9P244 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRFN1Q9P244 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
LRFN1Q9P244 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.98■□□□□ 0.63
LRFN1Q9P244 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.98■□□□□ 0.63
LRFN1Q9P244 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
LRFN1Q9P244 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.98■□□□□ 0.63
LRFN1Q9P244 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.98■□□□□ 0.63
LRFN1Q9P244 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.98■□□□□ 0.63
LRFN1Q9P244 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.98■□□□□ 0.63
LRFN1Q9P244 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.98■□□□□ 0.63
LRFN1Q9P244 CYP2T3P-201ENST00000601990 817 ntBASIC18.98■□□□□ 0.63
LRFN1Q9P244 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.98■□□□□ 0.63
LRFN1Q9P244 MYC-209ENST00000641252 345 ntBASIC18.98■□□□□ 0.63
LRFN1Q9P244 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRFN1Q9P244 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRFN1Q9P244 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
LRFN1Q9P244 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
LRFN1Q9P244 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRFN1Q9P244 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
LRFN1Q9P244 AL117328.2-201ENST00000624617 1940 ntBASIC18.98■□□□□ 0.63
LRFN1Q9P244 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRFN1Q9P244 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRFN1Q9P244 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.97■□□□□ 0.63
LRFN1Q9P244 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRFN1Q9P244 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LRFN1Q9P244 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LRFN1Q9P244 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRFN1Q9P244 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
LRFN1Q9P244 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRFN1Q9P244 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.97■□□□□ 0.63
LRFN1Q9P244 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.97■□□□□ 0.63
LRFN1Q9P244 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LRFN1Q9P244 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.97■□□□□ 0.63
LRFN1Q9P244 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.97■□□□□ 0.63
LRFN1Q9P244 AC083880.1-201ENST00000608266 535 ntBASIC18.97■□□□□ 0.63
LRFN1Q9P244 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.97■□□□□ 0.63
LRFN1Q9P244 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRFN1Q9P244 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRFN1Q9P244 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRFN1Q9P244 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.97■□□□□ 0.63
LRFN1Q9P244 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LRFN1Q9P244 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
LRFN1Q9P244 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRFN1Q9P244 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRFN1Q9P244 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.97■□□□□ 0.63
LRFN1Q9P244 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRFN1Q9P244 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.96■□□□□ 0.63
LRFN1Q9P244 AC116050.2-201ENST00000612102 1779 ntBASIC18.96■□□□□ 0.63
LRFN1Q9P244 KRT17P1-201ENST00000399211 1546 ntBASIC18.96■□□□□ 0.63
LRFN1Q9P244 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRFN1Q9P244 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LRFN1Q9P244 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRFN1Q9P244 MCRIP2P1-201ENST00000394346 511 ntBASIC18.96■□□□□ 0.63
LRFN1Q9P244 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.96■□□□□ 0.63
LRFN1Q9P244 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.96■□□□□ 0.63
LRFN1Q9P244 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.96■□□□□ 0.63
LRFN1Q9P244 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC18.96■□□□□ 0.63
LRFN1Q9P244 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.96■□□□□ 0.63
LRFN1Q9P244 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRFN1Q9P244 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.96■□□□□ 0.63
LRFN1Q9P244 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRFN1Q9P244 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.96■□□□□ 0.63
LRFN1Q9P244 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
LRFN1Q9P244 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRFN1Q9P244 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRFN1Q9P244 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.96■□□□□ 0.63
LRFN1Q9P244 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRFN1Q9P244 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
LRFN1Q9P244 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRFN1Q9P244 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
LRFN1Q9P244 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRFN1Q9P244 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRFN1Q9P244 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRFN1Q9P244 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRFN1Q9P244 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRFN1Q9P244 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRFN1Q9P244 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.95■□□□□ 0.62
LRFN1Q9P244 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LRFN1Q9P244 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.95■□□□□ 0.62
LRFN1Q9P244 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
LRFN1Q9P244 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LRFN1Q9P244 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LRFN1Q9P244 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LRFN1Q9P244 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LRFN1Q9P244 CLDN5-201ENST00000403084 2357 ntBASIC18.95■□□□□ 0.62
LRFN1Q9P244 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.94■□□□□ 0.62
LRFN1Q9P244 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRFN1Q9P244 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRFN1Q9P244 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRFN1Q9P244 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRFN1Q9P244 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms