Protein–RNA interactions for Protein: Q9NR80

ARHGEF4, Rho guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF4Q9NR80 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.67■■□□□ 1.06
ARHGEF4Q9NR80 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.67■■□□□ 1.06
ARHGEF4Q9NR80 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.67■■□□□ 1.06
ARHGEF4Q9NR80 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
ARHGEF4Q9NR80 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.67■■□□□ 1.06
ARHGEF4Q9NR80 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ARHGEF4Q9NR80 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ARHGEF4Q9NR80 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
ARHGEF4Q9NR80 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.66■■□□□ 1.06
ARHGEF4Q9NR80 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC21.66■■□□□ 1.06
ARHGEF4Q9NR80 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.66■■□□□ 1.06
ARHGEF4Q9NR80 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ARHGEF4Q9NR80 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ARHGEF4Q9NR80 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
ARHGEF4Q9NR80 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.66■■□□□ 1.06
ARHGEF4Q9NR80 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.66■■□□□ 1.06
ARHGEF4Q9NR80 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.66■■□□□ 1.06
ARHGEF4Q9NR80 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
ARHGEF4Q9NR80 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.66■■□□□ 1.06
ARHGEF4Q9NR80 AC061975.6-201ENST00000579045 1553 ntBASIC21.65■■□□□ 1.06
ARHGEF4Q9NR80 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ARHGEF4Q9NR80 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
ARHGEF4Q9NR80 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.65■■□□□ 1.06
ARHGEF4Q9NR80 AC068338.2-201ENST00000563278 1430 ntBASIC21.65■■□□□ 1.06
ARHGEF4Q9NR80 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.65■■□□□ 1.06
ARHGEF4Q9NR80 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.65■■□□□ 1.06
ARHGEF4Q9NR80 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ARHGEF4Q9NR80 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ARHGEF4Q9NR80 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ARHGEF4Q9NR80 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.65■■□□□ 1.06
ARHGEF4Q9NR80 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.65■■□□□ 1.06
ARHGEF4Q9NR80 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.65■■□□□ 1.06
ARHGEF4Q9NR80 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ARHGEF4Q9NR80 KRT18P6-201ENST00000555540 1265 ntBASIC21.65■■□□□ 1.06
ARHGEF4Q9NR80 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.65■■□□□ 1.06
ARHGEF4Q9NR80 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC21.65■■□□□ 1.06
ARHGEF4Q9NR80 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ARHGEF4Q9NR80 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.65■■□□□ 1.06
ARHGEF4Q9NR80 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
ARHGEF4Q9NR80 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.65■■□□□ 1.06
ARHGEF4Q9NR80 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.64■■□□□ 1.06
ARHGEF4Q9NR80 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
ARHGEF4Q9NR80 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.64■■□□□ 1.06
ARHGEF4Q9NR80 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ARHGEF4Q9NR80 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.64■■□□□ 1.05
ARHGEF4Q9NR80 BET1L-204ENST00000410108 637 ntTSL 3 BASIC21.64■■□□□ 1.05
ARHGEF4Q9NR80 POU5F1P4-201ENST00000413175 1085 ntBASIC21.64■■□□□ 1.05
ARHGEF4Q9NR80 CYP2T1P-201ENST00000432607 1285 ntBASIC21.64■■□□□ 1.05
ARHGEF4Q9NR80 AC007322.4-201ENST00000509611 723 ntBASIC21.64■■□□□ 1.05
ARHGEF4Q9NR80 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
ARHGEF4Q9NR80 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
ARHGEF4Q9NR80 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.64■■□□□ 1.05
ARHGEF4Q9NR80 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
ARHGEF4Q9NR80 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ARHGEF4Q9NR80 AL049796.1-201ENST00000565336 1766 ntBASIC21.64■■□□□ 1.05
ARHGEF4Q9NR80 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ARHGEF4Q9NR80 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
ARHGEF4Q9NR80 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.63■■□□□ 1.05
ARHGEF4Q9NR80 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
ARHGEF4Q9NR80 AC069152.1-201ENST00000438030 544 ntBASIC21.63■■□□□ 1.05
ARHGEF4Q9NR80 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.63■■□□□ 1.05
ARHGEF4Q9NR80 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.63■■□□□ 1.05
ARHGEF4Q9NR80 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
ARHGEF4Q9NR80 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.63■■□□□ 1.05
ARHGEF4Q9NR80 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.63■■□□□ 1.05
ARHGEF4Q9NR80 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.63■■□□□ 1.05
ARHGEF4Q9NR80 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
ARHGEF4Q9NR80 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
ARHGEF4Q9NR80 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.63■■□□□ 1.05
ARHGEF4Q9NR80 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
ARHGEF4Q9NR80 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ARHGEF4Q9NR80 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
ARHGEF4Q9NR80 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ARHGEF4Q9NR80 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.62■■□□□ 1.05
ARHGEF4Q9NR80 AC133041.1-202ENST00000642053 222 ntBASIC21.62■■□□□ 1.05
ARHGEF4Q9NR80 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ARHGEF4Q9NR80 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ARHGEF4Q9NR80 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
ARHGEF4Q9NR80 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ARHGEF4Q9NR80 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ARHGEF4Q9NR80 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.62■■□□□ 1.05
ARHGEF4Q9NR80 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.61■■□□□ 1.05
ARHGEF4Q9NR80 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ARHGEF4Q9NR80 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ARHGEF4Q9NR80 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
ARHGEF4Q9NR80 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.61■■□□□ 1.05
ARHGEF4Q9NR80 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ARHGEF4Q9NR80 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ARHGEF4Q9NR80 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ARHGEF4Q9NR80 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ARHGEF4Q9NR80 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.61■■□□□ 1.05
ARHGEF4Q9NR80 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ARHGEF4Q9NR80 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.61■■□□□ 1.05
ARHGEF4Q9NR80 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.61■■□□□ 1.05
ARHGEF4Q9NR80 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.61■■□□□ 1.05
ARHGEF4Q9NR80 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ARHGEF4Q9NR80 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ARHGEF4Q9NR80 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
ARHGEF4Q9NR80 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ARHGEF4Q9NR80 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms