Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC23.3■■□□□ 1.32
PDLIM7Q9NR12 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC23.3■■□□□ 1.32
PDLIM7Q9NR12 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC23.3■■□□□ 1.32
PDLIM7Q9NR12 MFF-203ENST00000349901 1716 ntTSL 2 BASIC23.3■■□□□ 1.32
PDLIM7Q9NR12 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PDLIM7Q9NR12 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC23.29■■□□□ 1.32
PDLIM7Q9NR12 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC23.29■■□□□ 1.32
PDLIM7Q9NR12 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC23.29■■□□□ 1.32
PDLIM7Q9NR12 KRT17P1-201ENST00000399211 1546 ntBASIC23.29■■□□□ 1.32
PDLIM7Q9NR12 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC23.29■■□□□ 1.32
PDLIM7Q9NR12 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC23.29■■□□□ 1.32
PDLIM7Q9NR12 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC23.29■■□□□ 1.32
PDLIM7Q9NR12 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PDLIM7Q9NR12 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
PDLIM7Q9NR12 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PDLIM7Q9NR12 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PDLIM7Q9NR12 AC211429.1-201ENST00000415277 523 ntBASIC23.29■■□□□ 1.32
PDLIM7Q9NR12 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC23.29■■□□□ 1.32
PDLIM7Q9NR12 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC23.29■■□□□ 1.32
PDLIM7Q9NR12 AC060766.5-201ENST00000590539 871 ntBASIC23.29■■□□□ 1.32
PDLIM7Q9NR12 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
PDLIM7Q9NR12 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PDLIM7Q9NR12 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC23.29■■□□□ 1.32
PDLIM7Q9NR12 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PDLIM7Q9NR12 STX5-203ENST00000394690 1568 ntTSL 5 BASIC23.28■■□□□ 1.32
PDLIM7Q9NR12 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PDLIM7Q9NR12 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC23.28■■□□□ 1.32
PDLIM7Q9NR12 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC23.28■■□□□ 1.32
PDLIM7Q9NR12 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PDLIM7Q9NR12 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PDLIM7Q9NR12 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC23.28■■□□□ 1.32
PDLIM7Q9NR12 C1QBPP2-201ENST00000528754 825 ntBASIC23.28■■□□□ 1.32
PDLIM7Q9NR12 Z99916.2-201ENST00000604037 246 ntBASIC23.28■■□□□ 1.32
PDLIM7Q9NR12 AC010331.1-201ENST00000611423 582 ntBASIC23.28■■□□□ 1.32
PDLIM7Q9NR12 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC23.28■■□□□ 1.32
PDLIM7Q9NR12 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC23.28■■□□□ 1.32
PDLIM7Q9NR12 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PDLIM7Q9NR12 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PDLIM7Q9NR12 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PDLIM7Q9NR12 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PDLIM7Q9NR12 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PDLIM7Q9NR12 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
PDLIM7Q9NR12 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
PDLIM7Q9NR12 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC23.27■■□□□ 1.32
PDLIM7Q9NR12 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC23.27■■□□□ 1.32
PDLIM7Q9NR12 NME6-213ENST00000451657 871 ntTSL 2 BASIC23.27■■□□□ 1.32
PDLIM7Q9NR12 SNORA78-201ENST00000459373 127 ntBASIC23.27■■□□□ 1.32
PDLIM7Q9NR12 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC23.27■■□□□ 1.32
PDLIM7Q9NR12 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC23.27■■□□□ 1.32
PDLIM7Q9NR12 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC23.27■■□□□ 1.32
PDLIM7Q9NR12 HLA-B-256ENST00000639848 1089 ntBASIC23.27■■□□□ 1.32
PDLIM7Q9NR12 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
PDLIM7Q9NR12 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PDLIM7Q9NR12 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PDLIM7Q9NR12 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
PDLIM7Q9NR12 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PDLIM7Q9NR12 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PDLIM7Q9NR12 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PDLIM7Q9NR12 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PDLIM7Q9NR12 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PDLIM7Q9NR12 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PDLIM7Q9NR12 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PDLIM7Q9NR12 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PDLIM7Q9NR12 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PDLIM7Q9NR12 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC23.26■■□□□ 1.31
PDLIM7Q9NR12 AL355472.2-201ENST00000422958 438 ntBASIC23.26■■□□□ 1.31
PDLIM7Q9NR12 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC23.26■■□□□ 1.31
PDLIM7Q9NR12 CYP2T3P-201ENST00000601990 817 ntBASIC23.26■■□□□ 1.31
PDLIM7Q9NR12 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PDLIM7Q9NR12 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC23.26■■□□□ 1.31
PDLIM7Q9NR12 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
PDLIM7Q9NR12 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
PDLIM7Q9NR12 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PDLIM7Q9NR12 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
PDLIM7Q9NR12 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
PDLIM7Q9NR12 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
PDLIM7Q9NR12 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
PDLIM7Q9NR12 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC23.25■■□□□ 1.31
PDLIM7Q9NR12 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PDLIM7Q9NR12 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC23.25■■□□□ 1.31
PDLIM7Q9NR12 CBFB-203ENST00000561924 584 ntTSL 5 BASIC23.25■■□□□ 1.31
PDLIM7Q9NR12 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC23.25■■□□□ 1.31
PDLIM7Q9NR12 REXO1L12P-201ENST00000622156 912 ntBASIC23.25■■□□□ 1.31
PDLIM7Q9NR12 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PDLIM7Q9NR12 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PDLIM7Q9NR12 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC23.25■■□□□ 1.31
PDLIM7Q9NR12 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
PDLIM7Q9NR12 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PDLIM7Q9NR12 TUB-203ENST00000534099 1759 ntTSL 2 BASIC23.24■■□□□ 1.31
PDLIM7Q9NR12 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PDLIM7Q9NR12 STK25-234ENST00000535007 2459 ntTSL 2 BASIC23.24■■□□□ 1.31
PDLIM7Q9NR12 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PDLIM7Q9NR12 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PDLIM7Q9NR12 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
PDLIM7Q9NR12 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
PDLIM7Q9NR12 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PDLIM7Q9NR12 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PDLIM7Q9NR12 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PDLIM7Q9NR12 CD44-222ENST00000526025 1052 ntTSL 2 BASIC23.24■■□□□ 1.31
PDLIM7Q9NR12 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC23.24■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms