Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
NEUROD4Q9HD90 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NEUROD4Q9HD90 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
NEUROD4Q9HD90 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NEUROD4Q9HD90 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
NEUROD4Q9HD90 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NEUROD4Q9HD90 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NEUROD4Q9HD90 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.48■□□□□ 0.71
NEUROD4Q9HD90 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NEUROD4Q9HD90 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NEUROD4Q9HD90 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NEUROD4Q9HD90 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
NEUROD4Q9HD90 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NEUROD4Q9HD90 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.47■□□□□ 0.71
NEUROD4Q9HD90 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.47■□□□□ 0.71
NEUROD4Q9HD90 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NEUROD4Q9HD90 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NEUROD4Q9HD90 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NEUROD4Q9HD90 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NEUROD4Q9HD90 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NEUROD4Q9HD90 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NEUROD4Q9HD90 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NEUROD4Q9HD90 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NEUROD4Q9HD90 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NEUROD4Q9HD90 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NEUROD4Q9HD90 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NEUROD4Q9HD90 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.47■□□□□ 0.71
NEUROD4Q9HD90 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NEUROD4Q9HD90 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
NEUROD4Q9HD90 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
NEUROD4Q9HD90 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NEUROD4Q9HD90 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NEUROD4Q9HD90 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NEUROD4Q9HD90 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.46■□□□□ 0.71
NEUROD4Q9HD90 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
NEUROD4Q9HD90 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NEUROD4Q9HD90 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NEUROD4Q9HD90 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.46■□□□□ 0.71
NEUROD4Q9HD90 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NEUROD4Q9HD90 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NEUROD4Q9HD90 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NEUROD4Q9HD90 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NEUROD4Q9HD90 AP005212.1-201ENST00000581547 1997 ntBASIC19.46■□□□□ 0.71
NEUROD4Q9HD90 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NEUROD4Q9HD90 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
NEUROD4Q9HD90 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.46■□□□□ 0.71
NEUROD4Q9HD90 GABARAPL3-202ENST00000624044 1851 ntBASIC19.45■□□□□ 0.7
NEUROD4Q9HD90 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.45■□□□□ 0.7
NEUROD4Q9HD90 LINC01006-201ENST00000333319 2292 ntBASIC19.45■□□□□ 0.7
NEUROD4Q9HD90 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
NEUROD4Q9HD90 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
NEUROD4Q9HD90 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
NEUROD4Q9HD90 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NEUROD4Q9HD90 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NEUROD4Q9HD90 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.45■□□□□ 0.7
NEUROD4Q9HD90 AC090192.1-201ENST00000517740 490 ntBASIC19.45■□□□□ 0.7
NEUROD4Q9HD90 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NEUROD4Q9HD90 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC19.45■□□□□ 0.7
NEUROD4Q9HD90 RARRES2P11-201ENST00000635158 484 ntBASIC19.45■□□□□ 0.7
NEUROD4Q9HD90 AC007225.1-201ENST00000566331 1836 ntBASIC19.45■□□□□ 0.7
NEUROD4Q9HD90 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
NEUROD4Q9HD90 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
NEUROD4Q9HD90 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
NEUROD4Q9HD90 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
NEUROD4Q9HD90 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.45■□□□□ 0.7
NEUROD4Q9HD90 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NEUROD4Q9HD90 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NEUROD4Q9HD90 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NEUROD4Q9HD90 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.44■□□□□ 0.7
NEUROD4Q9HD90 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NEUROD4Q9HD90 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NEUROD4Q9HD90 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NEUROD4Q9HD90 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
NEUROD4Q9HD90 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.44■□□□□ 0.7
NEUROD4Q9HD90 AC034268.1-201ENST00000441047 882 ntBASIC19.44■□□□□ 0.7
NEUROD4Q9HD90 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.44■□□□□ 0.7
NEUROD4Q9HD90 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.44■□□□□ 0.7
NEUROD4Q9HD90 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.44■□□□□ 0.7
NEUROD4Q9HD90 AL137784.2-201ENST00000607332 1000 ntBASIC19.44■□□□□ 0.7
NEUROD4Q9HD90 AC104187.1-201ENST00000607510 612 ntBASIC19.44■□□□□ 0.7
NEUROD4Q9HD90 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.44■□□□□ 0.7
NEUROD4Q9HD90 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NEUROD4Q9HD90 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
NEUROD4Q9HD90 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NEUROD4Q9HD90 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
NEUROD4Q9HD90 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.43■□□□□ 0.7
NEUROD4Q9HD90 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NEUROD4Q9HD90 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
NEUROD4Q9HD90 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NEUROD4Q9HD90 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
NEUROD4Q9HD90 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.43■□□□□ 0.7
NEUROD4Q9HD90 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.43■□□□□ 0.7
NEUROD4Q9HD90 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NEUROD4Q9HD90 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.43■□□□□ 0.7
NEUROD4Q9HD90 CCDC92B-201ENST00000575506 885 ntBASIC19.43■□□□□ 0.7
NEUROD4Q9HD90 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.43■□□□□ 0.7
NEUROD4Q9HD90 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NEUROD4Q9HD90 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.43■□□□□ 0.7
NEUROD4Q9HD90 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.43■□□□□ 0.7
NEUROD4Q9HD90 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms