Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.4■□□□□ 0.54
NELFAQ9H3P2 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
NELFAQ9H3P2 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NELFAQ9H3P2 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
NELFAQ9H3P2 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.39■□□□□ 0.54
NELFAQ9H3P2 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
NELFAQ9H3P2 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NELFAQ9H3P2 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
NELFAQ9H3P2 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NELFAQ9H3P2 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NELFAQ9H3P2 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
NELFAQ9H3P2 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
NELFAQ9H3P2 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NELFAQ9H3P2 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.39■□□□□ 0.53
NELFAQ9H3P2 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.39■□□□□ 0.53
NELFAQ9H3P2 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
NELFAQ9H3P2 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.39■□□□□ 0.53
NELFAQ9H3P2 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NELFAQ9H3P2 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.39■□□□□ 0.53
NELFAQ9H3P2 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NELFAQ9H3P2 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
NELFAQ9H3P2 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.39■□□□□ 0.53
NELFAQ9H3P2 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NELFAQ9H3P2 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NELFAQ9H3P2 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
NELFAQ9H3P2 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NELFAQ9H3P2 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NELFAQ9H3P2 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.38■□□□□ 0.53
NELFAQ9H3P2 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NELFAQ9H3P2 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
NELFAQ9H3P2 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NELFAQ9H3P2 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NELFAQ9H3P2 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NELFAQ9H3P2 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.38■□□□□ 0.53
NELFAQ9H3P2 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.38■□□□□ 0.53
NELFAQ9H3P2 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NELFAQ9H3P2 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NELFAQ9H3P2 KRT18P11-201ENST00000435214 1283 ntBASIC18.38■□□□□ 0.53
NELFAQ9H3P2 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.38■□□□□ 0.53
NELFAQ9H3P2 MFSD11-216ENST00000590393 1141 ntBASIC18.38■□□□□ 0.53
NELFAQ9H3P2 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.38■□□□□ 0.53
NELFAQ9H3P2 AL137784.2-201ENST00000607332 1000 ntBASIC18.38■□□□□ 0.53
NELFAQ9H3P2 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.38■□□□□ 0.53
NELFAQ9H3P2 AC120498.10-201ENST00000621827 505 ntBASIC18.38■□□□□ 0.53
NELFAQ9H3P2 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.38■□□□□ 0.53
NELFAQ9H3P2 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
NELFAQ9H3P2 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NELFAQ9H3P2 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.38■□□□□ 0.53
NELFAQ9H3P2 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.38■□□□□ 0.53
NELFAQ9H3P2 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NELFAQ9H3P2 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NELFAQ9H3P2 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
NELFAQ9H3P2 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NELFAQ9H3P2 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NELFAQ9H3P2 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NELFAQ9H3P2 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
NELFAQ9H3P2 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NELFAQ9H3P2 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.37■□□□□ 0.53
NELFAQ9H3P2 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
NELFAQ9H3P2 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.37■□□□□ 0.53
NELFAQ9H3P2 AC004911.1-201ENST00000416316 871 ntBASIC18.37■□□□□ 0.53
NELFAQ9H3P2 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.37■□□□□ 0.53
NELFAQ9H3P2 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.37■□□□□ 0.53
NELFAQ9H3P2 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.37■□□□□ 0.53
NELFAQ9H3P2 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NELFAQ9H3P2 KRT16P2-201ENST00000414673 1423 ntBASIC18.37■□□□□ 0.53
NELFAQ9H3P2 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NELFAQ9H3P2 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NELFAQ9H3P2 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
NELFAQ9H3P2 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.37■□□□□ 0.53
NELFAQ9H3P2 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NELFAQ9H3P2 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NELFAQ9H3P2 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.37■□□□□ 0.53
NELFAQ9H3P2 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NELFAQ9H3P2 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
NELFAQ9H3P2 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
NELFAQ9H3P2 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NELFAQ9H3P2 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
NELFAQ9H3P2 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
NELFAQ9H3P2 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
NELFAQ9H3P2 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NELFAQ9H3P2 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
NELFAQ9H3P2 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.36■□□□□ 0.53
NELFAQ9H3P2 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.36■□□□□ 0.53
NELFAQ9H3P2 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.36■□□□□ 0.53
NELFAQ9H3P2 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.36■□□□□ 0.53
NELFAQ9H3P2 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NELFAQ9H3P2 SLC7A5P1-201ENST00000568957 537 ntBASIC18.36■□□□□ 0.53
NELFAQ9H3P2 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
NELFAQ9H3P2 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
NELFAQ9H3P2 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
NELFAQ9H3P2 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NELFAQ9H3P2 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
NELFAQ9H3P2 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NELFAQ9H3P2 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NELFAQ9H3P2 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NELFAQ9H3P2 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NELFAQ9H3P2 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NELFAQ9H3P2 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
NELFAQ9H3P2 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms