Protein–RNA interactions for Protein: Q96FI4

NEIL1, Endonuclease 8-like 1, humanhuman

Predicted RBP Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1Q96FI4 PARP1-210ENST00000629232 477 ntTSL 5 BASIC17.42■□□□□ 0.38
NEIL1Q96FI4 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NEIL1Q96FI4 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC17.42■□□□□ 0.38
NEIL1Q96FI4 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC17.42■□□□□ 0.38
NEIL1Q96FI4 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
NEIL1Q96FI4 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NEIL1Q96FI4 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NEIL1Q96FI4 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NEIL1Q96FI4 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NEIL1Q96FI4 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.41■□□□□ 0.38
NEIL1Q96FI4 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NEIL1Q96FI4 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NEIL1Q96FI4 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
NEIL1Q96FI4 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
NEIL1Q96FI4 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
NEIL1Q96FI4 CROCCP5-201ENST00000436658 830 ntBASIC17.41■□□□□ 0.38
NEIL1Q96FI4 PPP1R14BP3-201ENST00000509033 445 ntBASIC17.41■□□□□ 0.38
NEIL1Q96FI4 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.41■□□□□ 0.38
NEIL1Q96FI4 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC17.41■□□□□ 0.38
NEIL1Q96FI4 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NEIL1Q96FI4 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NEIL1Q96FI4 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
NEIL1Q96FI4 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NEIL1Q96FI4 AL121603.2-201ENST00000557373 2117 ntBASIC17.41■□□□□ 0.38
NEIL1Q96FI4 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NEIL1Q96FI4 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NEIL1Q96FI4 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
NEIL1Q96FI4 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC17.4■□□□□ 0.38
NEIL1Q96FI4 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
NEIL1Q96FI4 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
NEIL1Q96FI4 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
NEIL1Q96FI4 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.4■□□□□ 0.38
NEIL1Q96FI4 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
NEIL1Q96FI4 CNN2P6-201ENST00000439038 900 ntBASIC17.4■□□□□ 0.38
NEIL1Q96FI4 AC245052.3-201ENST00000450182 901 ntBASIC17.4■□□□□ 0.38
NEIL1Q96FI4 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NEIL1Q96FI4 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.4■□□□□ 0.38
NEIL1Q96FI4 AC243732.1-201ENST00000612648 864 ntBASIC17.4■□□□□ 0.38
NEIL1Q96FI4 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
NEIL1Q96FI4 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.4■□□□□ 0.38
NEIL1Q96FI4 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
NEIL1Q96FI4 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
NEIL1Q96FI4 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.4■□□□□ 0.38
NEIL1Q96FI4 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
NEIL1Q96FI4 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
NEIL1Q96FI4 ME2-206ENST00000638410 2289 ntTSL 5 BASIC17.4■□□□□ 0.38
NEIL1Q96FI4 ME2-210ENST00000639255 2262 ntTSL 5 BASIC17.4■□□□□ 0.38
NEIL1Q96FI4 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
NEIL1Q96FI4 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
NEIL1Q96FI4 RBM17P2-201ENST00000616397 1405 ntBASIC17.39■□□□□ 0.38
NEIL1Q96FI4 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
NEIL1Q96FI4 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NEIL1Q96FI4 AC007322.4-201ENST00000509611 723 ntBASIC17.39■□□□□ 0.37
NEIL1Q96FI4 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
NEIL1Q96FI4 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NEIL1Q96FI4 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.39■□□□□ 0.37
NEIL1Q96FI4 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.39■□□□□ 0.37
NEIL1Q96FI4 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.39■□□□□ 0.37
NEIL1Q96FI4 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
NEIL1Q96FI4 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC17.39■□□□□ 0.37
NEIL1Q96FI4 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.39■□□□□ 0.37
NEIL1Q96FI4 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.39■□□□□ 0.37
NEIL1Q96FI4 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NEIL1Q96FI4 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
NEIL1Q96FI4 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
NEIL1Q96FI4 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NEIL1Q96FI4 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
NEIL1Q96FI4 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC17.38■□□□□ 0.37
NEIL1Q96FI4 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
NEIL1Q96FI4 ID1-201ENST00000376105 1233 ntBASIC17.38■□□□□ 0.37
NEIL1Q96FI4 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC17.38■□□□□ 0.37
NEIL1Q96FI4 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.38■□□□□ 0.37
NEIL1Q96FI4 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
NEIL1Q96FI4 PALM-208ENST00000592155 2272 ntTSL 4 BASIC17.38■□□□□ 0.37
NEIL1Q96FI4 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC17.38■□□□□ 0.37
NEIL1Q96FI4 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
NEIL1Q96FI4 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NEIL1Q96FI4 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC17.38■□□□□ 0.37
NEIL1Q96FI4 MFF-203ENST00000349901 1716 ntTSL 2 BASIC17.38■□□□□ 0.37
NEIL1Q96FI4 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NEIL1Q96FI4 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NEIL1Q96FI4 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NEIL1Q96FI4 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NEIL1Q96FI4 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
NEIL1Q96FI4 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
NEIL1Q96FI4 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
NEIL1Q96FI4 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NEIL1Q96FI4 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC17.37■□□□□ 0.37
NEIL1Q96FI4 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC17.37■□□□□ 0.37
NEIL1Q96FI4 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NEIL1Q96FI4 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NEIL1Q96FI4 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.37■□□□□ 0.37
NEIL1Q96FI4 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC17.37■□□□□ 0.37
NEIL1Q96FI4 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.37■□□□□ 0.37
NEIL1Q96FI4 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NEIL1Q96FI4 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NEIL1Q96FI4 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
NEIL1Q96FI4 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NEIL1Q96FI4 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
NEIL1Q96FI4 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms