Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
SMARCC1Q92922 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC26.66■■□□□ 1.86
SMARCC1Q92922 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC26.66■■□□□ 1.86
SMARCC1Q92922 AC116050.2-201ENST00000612102 1779 ntBASIC26.66■■□□□ 1.86
SMARCC1Q92922 PKM-204ENST00000449901 2526 ntTSL 2 BASIC26.66■■□□□ 1.86
SMARCC1Q92922 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC26.66■■□□□ 1.86
SMARCC1Q92922 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC26.66■■□□□ 1.86
SMARCC1Q92922 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
SMARCC1Q92922 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC26.65■■□□□ 1.86
SMARCC1Q92922 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
SMARCC1Q92922 AL135905.2-201ENST00000584934 1404 ntBASIC26.65■■□□□ 1.86
SMARCC1Q92922 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
SMARCC1Q92922 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SMARCC1Q92922 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SMARCC1Q92922 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SMARCC1Q92922 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC26.65■■□□□ 1.86
SMARCC1Q92922 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
SMARCC1Q92922 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
SMARCC1Q92922 AC120498.8-201ENST00000614275 531 ntBASIC26.65■■□□□ 1.86
SMARCC1Q92922 AL023875.1-201ENST00000640777 796 ntBASIC26.65■■□□□ 1.86
SMARCC1Q92922 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
SMARCC1Q92922 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SMARCC1Q92922 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC26.65■■□□□ 1.86
SMARCC1Q92922 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
SMARCC1Q92922 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
SMARCC1Q92922 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
SMARCC1Q92922 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.86
SMARCC1Q92922 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
SMARCC1Q92922 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
SMARCC1Q92922 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
SMARCC1Q92922 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
SMARCC1Q92922 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC26.64■■□□□ 1.86
SMARCC1Q92922 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC26.64■■□□□ 1.86
SMARCC1Q92922 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC26.64■■□□□ 1.86
SMARCC1Q92922 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
SMARCC1Q92922 THEM4-205ENST00000489410 643 ntTSL 2 BASIC26.64■■□□□ 1.86
SMARCC1Q92922 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC26.64■■□□□ 1.86
SMARCC1Q92922 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC26.64■■□□□ 1.86
SMARCC1Q92922 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC26.64■■□□□ 1.85
SMARCC1Q92922 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC26.64■■□□□ 1.85
SMARCC1Q92922 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC26.63■■□□□ 1.85
SMARCC1Q92922 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
SMARCC1Q92922 AC239809.2-201ENST00000415381 517 ntBASIC26.63■■□□□ 1.85
SMARCC1Q92922 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC26.63■■□□□ 1.85
SMARCC1Q92922 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC26.63■■□□□ 1.85
SMARCC1Q92922 TK2-204ENST00000525974 1178 ntTSL 2 BASIC26.63■■□□□ 1.85
SMARCC1Q92922 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC26.63■■□□□ 1.85
SMARCC1Q92922 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC26.63■■□□□ 1.85
SMARCC1Q92922 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC26.63■■□□□ 1.85
SMARCC1Q92922 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC26.63■■□□□ 1.85
SMARCC1Q92922 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC26.63■■□□□ 1.85
SMARCC1Q92922 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC26.62■■□□□ 1.85
SMARCC1Q92922 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
SMARCC1Q92922 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC26.62■■□□□ 1.85
SMARCC1Q92922 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC26.62■■□□□ 1.85
SMARCC1Q92922 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC26.62■■□□□ 1.85
SMARCC1Q92922 KRT18P21-201ENST00000515767 1272 ntBASIC26.62■■□□□ 1.85
SMARCC1Q92922 DHDH-203ENST00000522614 776 ntTSL 5 BASIC26.62■■□□□ 1.85
SMARCC1Q92922 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC26.62■■□□□ 1.85
SMARCC1Q92922 AC110285.5-201ENST00000611501 352 ntBASIC26.62■■□□□ 1.85
SMARCC1Q92922 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC26.62■■□□□ 1.85
SMARCC1Q92922 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
SMARCC1Q92922 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
SMARCC1Q92922 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
SMARCC1Q92922 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC26.62■■□□□ 1.85
SMARCC1Q92922 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC26.62■■□□□ 1.85
SMARCC1Q92922 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC26.62■■□□□ 1.85
SMARCC1Q92922 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC26.62■■□□□ 1.85
SMARCC1Q92922 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SMARCC1Q92922 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC26.61■■□□□ 1.85
SMARCC1Q92922 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC26.61■■□□□ 1.85
SMARCC1Q92922 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC26.61■■□□□ 1.85
SMARCC1Q92922 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC26.61■■□□□ 1.85
SMARCC1Q92922 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC26.61■■□□□ 1.85
SMARCC1Q92922 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC26.61■■□□□ 1.85
SMARCC1Q92922 MIR4785-201ENST00000585005 73 ntBASIC26.61■■□□□ 1.85
SMARCC1Q92922 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC26.61■■□□□ 1.85
SMARCC1Q92922 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
SMARCC1Q92922 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SMARCC1Q92922 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC26.61■■□□□ 1.85
SMARCC1Q92922 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
SMARCC1Q92922 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
SMARCC1Q92922 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
SMARCC1Q92922 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
SMARCC1Q92922 AC087633.2-202ENST00000565166 1439 ntBASIC26.6■■□□□ 1.85
SMARCC1Q92922 AC005829.2-201ENST00000571422 1056 ntBASIC26.6■■□□□ 1.85
SMARCC1Q92922 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
SMARCC1Q92922 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC26.6■■□□□ 1.85
SMARCC1Q92922 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC26.6■■□□□ 1.85
SMARCC1Q92922 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC26.6■■□□□ 1.85
SMARCC1Q92922 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC26.6■■□□□ 1.85
SMARCC1Q92922 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
SMARCC1Q92922 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC26.59■■□□□ 1.85
SMARCC1Q92922 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
SMARCC1Q92922 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC26.59■■□□□ 1.85
SMARCC1Q92922 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
SMARCC1Q92922 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC26.59■■□□□ 1.85
SMARCC1Q92922 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
SMARCC1Q92922 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
SMARCC1Q92922 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC26.59■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms