Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
TRAF3IP1Q8TDR0 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.5■■□□□ 1.03
TRAF3IP1Q8TDR0 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TRAF3IP1Q8TDR0 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.5■■□□□ 1.03
TRAF3IP1Q8TDR0 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.5■■□□□ 1.03
TRAF3IP1Q8TDR0 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRAF3IP1Q8TDR0 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TRAF3IP1Q8TDR0 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRAF3IP1Q8TDR0 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRAF3IP1Q8TDR0 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRAF3IP1Q8TDR0 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRAF3IP1Q8TDR0 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
TRAF3IP1Q8TDR0 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.5■■□□□ 1.03
TRAF3IP1Q8TDR0 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRAF3IP1Q8TDR0 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRAF3IP1Q8TDR0 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRAF3IP1Q8TDR0 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.49■■□□□ 1.03
TRAF3IP1Q8TDR0 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.49■■□□□ 1.03
TRAF3IP1Q8TDR0 KRT16P2-201ENST00000414673 1423 ntBASIC21.49■■□□□ 1.03
TRAF3IP1Q8TDR0 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRAF3IP1Q8TDR0 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRAF3IP1Q8TDR0 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TRAF3IP1Q8TDR0 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.49■■□□□ 1.03
TRAF3IP1Q8TDR0 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.49■■□□□ 1.03
TRAF3IP1Q8TDR0 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TRAF3IP1Q8TDR0 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRAF3IP1Q8TDR0 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRAF3IP1Q8TDR0 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
TRAF3IP1Q8TDR0 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.49■■□□□ 1.03
TRAF3IP1Q8TDR0 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
TRAF3IP1Q8TDR0 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TRAF3IP1Q8TDR0 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRAF3IP1Q8TDR0 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.48■■□□□ 1.03
TRAF3IP1Q8TDR0 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.48■■□□□ 1.03
TRAF3IP1Q8TDR0 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.48■■□□□ 1.03
TRAF3IP1Q8TDR0 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.48■■□□□ 1.03
TRAF3IP1Q8TDR0 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.48■■□□□ 1.03
TRAF3IP1Q8TDR0 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.48■■□□□ 1.03
TRAF3IP1Q8TDR0 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.48■■□□□ 1.03
TRAF3IP1Q8TDR0 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRAF3IP1Q8TDR0 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TRAF3IP1Q8TDR0 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TRAF3IP1Q8TDR0 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.48■■□□□ 1.03
TRAF3IP1Q8TDR0 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRAF3IP1Q8TDR0 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRAF3IP1Q8TDR0 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.48■■□□□ 1.03
TRAF3IP1Q8TDR0 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
TRAF3IP1Q8TDR0 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.48■■□□□ 1.03
TRAF3IP1Q8TDR0 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
TRAF3IP1Q8TDR0 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRAF3IP1Q8TDR0 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRAF3IP1Q8TDR0 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.47■■□□□ 1.03
TRAF3IP1Q8TDR0 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRAF3IP1Q8TDR0 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRAF3IP1Q8TDR0 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
TRAF3IP1Q8TDR0 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TRAF3IP1Q8TDR0 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.47■■□□□ 1.03
TRAF3IP1Q8TDR0 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.47■■□□□ 1.03
TRAF3IP1Q8TDR0 AC245052.3-201ENST00000450182 901 ntBASIC21.47■■□□□ 1.03
TRAF3IP1Q8TDR0 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.47■■□□□ 1.03
TRAF3IP1Q8TDR0 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.47■■□□□ 1.03
TRAF3IP1Q8TDR0 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.47■■□□□ 1.03
TRAF3IP1Q8TDR0 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.47■■□□□ 1.03
TRAF3IP1Q8TDR0 AP001160.3-201ENST00000601484 763 ntBASIC21.47■■□□□ 1.03
TRAF3IP1Q8TDR0 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRAF3IP1Q8TDR0 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRAF3IP1Q8TDR0 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TRAF3IP1Q8TDR0 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.47■■□□□ 1.03
TRAF3IP1Q8TDR0 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TRAF3IP1Q8TDR0 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRAF3IP1Q8TDR0 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TRAF3IP1Q8TDR0 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.47■■□□□ 1.03
TRAF3IP1Q8TDR0 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
TRAF3IP1Q8TDR0 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRAF3IP1Q8TDR0 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRAF3IP1Q8TDR0 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
TRAF3IP1Q8TDR0 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.46■■□□□ 1.03
TRAF3IP1Q8TDR0 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC21.46■■□□□ 1.03
TRAF3IP1Q8TDR0 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRAF3IP1Q8TDR0 AL157384.1-201ENST00000445995 2473 ntBASIC21.46■■□□□ 1.03
TRAF3IP1Q8TDR0 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.46■■□□□ 1.03
TRAF3IP1Q8TDR0 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
TRAF3IP1Q8TDR0 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRAF3IP1Q8TDR0 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TRAF3IP1Q8TDR0 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRAF3IP1Q8TDR0 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TRAF3IP1Q8TDR0 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.46■■□□□ 1.03
TRAF3IP1Q8TDR0 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TRAF3IP1Q8TDR0 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRAF3IP1Q8TDR0 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRAF3IP1Q8TDR0 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TRAF3IP1Q8TDR0 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TRAF3IP1Q8TDR0 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRAF3IP1Q8TDR0 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.46■■□□□ 1.03
TRAF3IP1Q8TDR0 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.46■■□□□ 1.03
TRAF3IP1Q8TDR0 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRAF3IP1Q8TDR0 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TRAF3IP1Q8TDR0 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRAF3IP1Q8TDR0 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
TRAF3IP1Q8TDR0 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.45■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms