Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AC116050.2-201ENST00000612102 1779 ntBASIC22.24■■□□□ 1.15
LMO3Q8TAP4 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
LMO3Q8TAP4 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
LMO3Q8TAP4 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
LMO3Q8TAP4 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
LMO3Q8TAP4 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC22.24■■□□□ 1.15
LMO3Q8TAP4 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
LMO3Q8TAP4 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
LMO3Q8TAP4 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
LMO3Q8TAP4 AP005212.1-201ENST00000581547 1997 ntBASIC22.23■■□□□ 1.15
LMO3Q8TAP4 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC22.23■■□□□ 1.15
LMO3Q8TAP4 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
LMO3Q8TAP4 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
LMO3Q8TAP4 AC027702.1-201ENST00000563810 1770 ntBASIC22.23■■□□□ 1.15
LMO3Q8TAP4 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
LMO3Q8TAP4 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
LMO3Q8TAP4 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
LMO3Q8TAP4 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC22.23■■□□□ 1.15
LMO3Q8TAP4 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC22.23■■□□□ 1.15
LMO3Q8TAP4 HSCB-202ENST00000398941 955 ntTSL 2 BASIC22.23■■□□□ 1.15
LMO3Q8TAP4 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC22.23■■□□□ 1.15
LMO3Q8TAP4 CD44-222ENST00000526025 1052 ntTSL 2 BASIC22.23■■□□□ 1.15
LMO3Q8TAP4 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC22.23■■□□□ 1.15
LMO3Q8TAP4 ANKRD20A6P-201ENST00000618763 204 ntBASIC22.23■■□□□ 1.15
LMO3Q8TAP4 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
LMO3Q8TAP4 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
LMO3Q8TAP4 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
LMO3Q8TAP4 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC22.23■■□□□ 1.15
LMO3Q8TAP4 LINC01006-201ENST00000333319 2292 ntBASIC22.23■■□□□ 1.15
LMO3Q8TAP4 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
LMO3Q8TAP4 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC22.22■■□□□ 1.15
LMO3Q8TAP4 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
LMO3Q8TAP4 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
LMO3Q8TAP4 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
LMO3Q8TAP4 ME3-201ENST00000323418 1068 ntTSL 5 BASIC22.22■■□□□ 1.15
LMO3Q8TAP4 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC22.22■■□□□ 1.15
LMO3Q8TAP4 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
LMO3Q8TAP4 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
LMO3Q8TAP4 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC22.22■■□□□ 1.15
LMO3Q8TAP4 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
LMO3Q8TAP4 STAC-204ENST00000457375 1366 ntTSL 2 BASIC22.22■■□□□ 1.15
LMO3Q8TAP4 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
LMO3Q8TAP4 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
LMO3Q8TAP4 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC22.22■■□□□ 1.15
LMO3Q8TAP4 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
LMO3Q8TAP4 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
LMO3Q8TAP4 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC22.21■■□□□ 1.15
LMO3Q8TAP4 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
LMO3Q8TAP4 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
LMO3Q8TAP4 AC006015.1-201ENST00000429970 570 ntBASIC22.21■■□□□ 1.15
LMO3Q8TAP4 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
LMO3Q8TAP4 BRI3-207ENST00000539286 699 ntTSL 2 BASIC22.21■■□□□ 1.15
LMO3Q8TAP4 WWOX-218ENST00000627394 894 ntTSL 5 BASIC22.21■■□□□ 1.15
LMO3Q8TAP4 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
LMO3Q8TAP4 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
LMO3Q8TAP4 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
LMO3Q8TAP4 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC22.21■■□□□ 1.15
LMO3Q8TAP4 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
LMO3Q8TAP4 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
LMO3Q8TAP4 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.15
LMO3Q8TAP4 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC22.2■■□□□ 1.15
LMO3Q8TAP4 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.15
LMO3Q8TAP4 AC092667.1-201ENST00000434301 2586 ntBASIC22.2■■□□□ 1.14
LMO3Q8TAP4 FP700111.2-201ENST00000619190 1892 ntBASIC22.2■■□□□ 1.14
LMO3Q8TAP4 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC22.2■■□□□ 1.14
LMO3Q8TAP4 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.2■■□□□ 1.14
LMO3Q8TAP4 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC22.2■■□□□ 1.14
LMO3Q8TAP4 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
LMO3Q8TAP4 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
LMO3Q8TAP4 SPI1-203ENST00000533030 661 ntTSL 2 BASIC22.2■■□□□ 1.14
LMO3Q8TAP4 AL121603.2-201ENST00000557373 2117 ntBASIC22.2■■□□□ 1.14
LMO3Q8TAP4 MIR5787-201ENST00000611784 55 ntBASIC22.2■■□□□ 1.14
LMO3Q8TAP4 AC010536.3-201ENST00000620306 533 ntBASIC22.2■■□□□ 1.14
LMO3Q8TAP4 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
LMO3Q8TAP4 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
LMO3Q8TAP4 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
LMO3Q8TAP4 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC22.2■■□□□ 1.14
LMO3Q8TAP4 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC22.2■■□□□ 1.14
LMO3Q8TAP4 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
LMO3Q8TAP4 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
LMO3Q8TAP4 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC22.2■■□□□ 1.14
LMO3Q8TAP4 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
LMO3Q8TAP4 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC22.19■■□□□ 1.14
LMO3Q8TAP4 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC22.19■■□□□ 1.14
LMO3Q8TAP4 AC137761.2-201ENST00000561729 223 ntBASIC22.19■■□□□ 1.14
LMO3Q8TAP4 AC145350.3-201ENST00000569033 163 ntBASIC22.19■■□□□ 1.14
LMO3Q8TAP4 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
LMO3Q8TAP4 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
LMO3Q8TAP4 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
LMO3Q8TAP4 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC22.19■■□□□ 1.14
LMO3Q8TAP4 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC22.19■■□□□ 1.14
LMO3Q8TAP4 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
LMO3Q8TAP4 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
LMO3Q8TAP4 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
LMO3Q8TAP4 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
LMO3Q8TAP4 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC22.18■■□□□ 1.14
LMO3Q8TAP4 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
LMO3Q8TAP4 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
LMO3Q8TAP4 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC22.18■■□□□ 1.14
LMO3Q8TAP4 LINC01521-201ENST00000504184 1943 ntBASIC22.18■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms