Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.4
CCDC148Q8NFR7 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC148Q8NFR7 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC148Q8NFR7 CNN2P6-201ENST00000439038 900 ntBASIC23.82■■□□□ 1.4
CCDC148Q8NFR7 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC23.82■■□□□ 1.4
CCDC148Q8NFR7 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC148Q8NFR7 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC148Q8NFR7 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
CCDC148Q8NFR7 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC23.82■■□□□ 1.4
CCDC148Q8NFR7 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
CCDC148Q8NFR7 AC073111.5-205ENST00000641717 521 ntBASIC23.81■■□□□ 1.4
CCDC148Q8NFR7 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
CCDC148Q8NFR7 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC148Q8NFR7 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC23.81■■□□□ 1.4
CCDC148Q8NFR7 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC148Q8NFR7 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC148Q8NFR7 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC23.8■■□□□ 1.4
CCDC148Q8NFR7 AC116050.2-201ENST00000612102 1779 ntBASIC23.8■■□□□ 1.4
CCDC148Q8NFR7 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC23.8■■□□□ 1.4
CCDC148Q8NFR7 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC148Q8NFR7 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC23.8■■□□□ 1.4
CCDC148Q8NFR7 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC148Q8NFR7 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC148Q8NFR7 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC23.8■■□□□ 1.4
CCDC148Q8NFR7 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC148Q8NFR7 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC148Q8NFR7 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC148Q8NFR7 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC148Q8NFR7 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC23.8■■□□□ 1.4
CCDC148Q8NFR7 AC007322.1-201ENST00000426983 750 ntBASIC23.8■■□□□ 1.4
CCDC148Q8NFR7 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
CCDC148Q8NFR7 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC23.8■■□□□ 1.4
CCDC148Q8NFR7 CDV3P1-201ENST00000471403 739 ntBASIC23.8■■□□□ 1.4
CCDC148Q8NFR7 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC148Q8NFR7 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC23.8■■□□□ 1.4
CCDC148Q8NFR7 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC23.8■■□□□ 1.4
CCDC148Q8NFR7 AL162412.1-201ENST00000567129 965 ntBASIC23.8■■□□□ 1.4
CCDC148Q8NFR7 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
CCDC148Q8NFR7 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC148Q8NFR7 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC23.8■■□□□ 1.4
CCDC148Q8NFR7 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC148Q8NFR7 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC23.8■■□□□ 1.4
CCDC148Q8NFR7 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC148Q8NFR7 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC23.8■■□□□ 1.4
CCDC148Q8NFR7 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC148Q8NFR7 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC148Q8NFR7 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
CCDC148Q8NFR7 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC148Q8NFR7 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC148Q8NFR7 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC148Q8NFR7 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC148Q8NFR7 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC148Q8NFR7 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC148Q8NFR7 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC23.79■■□□□ 1.4
CCDC148Q8NFR7 AL591742.1-201ENST00000604433 565 ntBASIC23.79■■□□□ 1.4
CCDC148Q8NFR7 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC23.79■■□□□ 1.4
CCDC148Q8NFR7 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC148Q8NFR7 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC23.79■■□□□ 1.4
CCDC148Q8NFR7 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC148Q8NFR7 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
CCDC148Q8NFR7 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC148Q8NFR7 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC148Q8NFR7 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC148Q8NFR7 AL137060.1-201ENST00000618151 2648 ntBASIC23.78■■□□□ 1.4
CCDC148Q8NFR7 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
CCDC148Q8NFR7 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC148Q8NFR7 AC007322.3-201ENST00000426526 701 ntBASIC23.78■■□□□ 1.4
CCDC148Q8NFR7 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC23.78■■□□□ 1.4
CCDC148Q8NFR7 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC23.78■■□□□ 1.4
CCDC148Q8NFR7 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC23.78■■□□□ 1.4
CCDC148Q8NFR7 PARP1-210ENST00000629232 477 ntTSL 5 BASIC23.78■■□□□ 1.4
CCDC148Q8NFR7 PALM-208ENST00000592155 2272 ntTSL 4 BASIC23.78■■□□□ 1.4
CCDC148Q8NFR7 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC148Q8NFR7 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC148Q8NFR7 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC148Q8NFR7 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC148Q8NFR7 AC011484.1-201ENST00000377652 1995 ntBASIC23.78■■□□□ 1.4
CCDC148Q8NFR7 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
CCDC148Q8NFR7 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC23.78■■□□□ 1.4
CCDC148Q8NFR7 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC148Q8NFR7 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
CCDC148Q8NFR7 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC23.77■■□□□ 1.4
CCDC148Q8NFR7 AC121338.2-201ENST00000622535 1744 ntBASIC23.77■■□□□ 1.4
CCDC148Q8NFR7 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
CCDC148Q8NFR7 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC148Q8NFR7 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC148Q8NFR7 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC148Q8NFR7 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
CCDC148Q8NFR7 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC148Q8NFR7 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC23.77■■□□□ 1.4
CCDC148Q8NFR7 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC23.77■■□□□ 1.4
CCDC148Q8NFR7 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC148Q8NFR7 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC23.77■■□□□ 1.4
CCDC148Q8NFR7 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC148Q8NFR7 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC148Q8NFR7 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
CCDC148Q8NFR7 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC148Q8NFR7 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC148Q8NFR7 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC23.77■■□□□ 1.4
CCDC148Q8NFR7 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms