Protein–RNA interactions for Protein: Q8N9W5

DNAAF3, Dynein assembly factor 3, axonemal, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF3Q8N9W5 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.01■□□□□ 0.95
DNAAF3Q8N9W5 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
DNAAF3Q8N9W5 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
DNAAF3Q8N9W5 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
DNAAF3Q8N9W5 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
DNAAF3Q8N9W5 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
DNAAF3Q8N9W5 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
DNAAF3Q8N9W5 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
DNAAF3Q8N9W5 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
DNAAF3Q8N9W5 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
DNAAF3Q8N9W5 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21■□□□□ 0.95
DNAAF3Q8N9W5 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
DNAAF3Q8N9W5 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21■□□□□ 0.95
DNAAF3Q8N9W5 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
DNAAF3Q8N9W5 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
DNAAF3Q8N9W5 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21■□□□□ 0.95
DNAAF3Q8N9W5 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21■□□□□ 0.95
DNAAF3Q8N9W5 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
DNAAF3Q8N9W5 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21■□□□□ 0.95
DNAAF3Q8N9W5 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21■□□□□ 0.95
DNAAF3Q8N9W5 AC010141.2-201ENST00000452426 721 ntBASIC21■□□□□ 0.95
DNAAF3Q8N9W5 TESC-206ENST00000541210 936 ntTSL 3 BASIC21■□□□□ 0.95
DNAAF3Q8N9W5 DUX4L2-201ENST00000561772 1275 ntBASIC21■□□□□ 0.95
DNAAF3Q8N9W5 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21■□□□□ 0.95
DNAAF3Q8N9W5 DUX4L6-201ENST00000626483 1275 ntBASIC21■□□□□ 0.95
DNAAF3Q8N9W5 DUX4L1-201ENST00000627662 1275 ntBASIC21■□□□□ 0.95
DNAAF3Q8N9W5 DUX4L8-201ENST00000629013 1275 ntBASIC21■□□□□ 0.95
DNAAF3Q8N9W5 DUX4L3-201ENST00000630187 1275 ntBASIC21■□□□□ 0.95
DNAAF3Q8N9W5 DUX4L7-201ENST00000630678 1275 ntBASIC21■□□□□ 0.95
DNAAF3Q8N9W5 DUX4L5-201ENST00000630834 1275 ntBASIC21■□□□□ 0.95
DNAAF3Q8N9W5 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
DNAAF3Q8N9W5 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21■□□□□ 0.95
DNAAF3Q8N9W5 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
DNAAF3Q8N9W5 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
DNAAF3Q8N9W5 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21■□□□□ 0.95
DNAAF3Q8N9W5 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
DNAAF3Q8N9W5 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21■□□□□ 0.95
DNAAF3Q8N9W5 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21■□□□□ 0.95
DNAAF3Q8N9W5 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
DNAAF3Q8N9W5 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.99■□□□□ 0.95
DNAAF3Q8N9W5 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
DNAAF3Q8N9W5 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
DNAAF3Q8N9W5 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
DNAAF3Q8N9W5 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
DNAAF3Q8N9W5 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
DNAAF3Q8N9W5 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
DNAAF3Q8N9W5 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.99■□□□□ 0.95
DNAAF3Q8N9W5 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.99■□□□□ 0.95
DNAAF3Q8N9W5 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.99■□□□□ 0.95
DNAAF3Q8N9W5 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
DNAAF3Q8N9W5 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.99■□□□□ 0.95
DNAAF3Q8N9W5 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.99■□□□□ 0.95
DNAAF3Q8N9W5 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
DNAAF3Q8N9W5 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
DNAAF3Q8N9W5 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
DNAAF3Q8N9W5 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.99■□□□□ 0.95
DNAAF3Q8N9W5 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
DNAAF3Q8N9W5 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
DNAAF3Q8N9W5 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
DNAAF3Q8N9W5 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
DNAAF3Q8N9W5 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
DNAAF3Q8N9W5 KRT16P2-201ENST00000414673 1423 ntBASIC20.98■□□□□ 0.95
DNAAF3Q8N9W5 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
DNAAF3Q8N9W5 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
DNAAF3Q8N9W5 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
DNAAF3Q8N9W5 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
DNAAF3Q8N9W5 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.98■□□□□ 0.95
DNAAF3Q8N9W5 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.98■□□□□ 0.95
DNAAF3Q8N9W5 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.98■□□□□ 0.95
DNAAF3Q8N9W5 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.98■□□□□ 0.95
DNAAF3Q8N9W5 AP001160.3-201ENST00000601484 763 ntBASIC20.98■□□□□ 0.95
DNAAF3Q8N9W5 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.98■□□□□ 0.95
DNAAF3Q8N9W5 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
DNAAF3Q8N9W5 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
DNAAF3Q8N9W5 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
DNAAF3Q8N9W5 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.98■□□□□ 0.95
DNAAF3Q8N9W5 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
DNAAF3Q8N9W5 FEM1AP1-201ENST00000431297 1995 ntBASIC20.97■□□□□ 0.95
DNAAF3Q8N9W5 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
DNAAF3Q8N9W5 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
DNAAF3Q8N9W5 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.97■□□□□ 0.95
DNAAF3Q8N9W5 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.97■□□□□ 0.95
DNAAF3Q8N9W5 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
DNAAF3Q8N9W5 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
DNAAF3Q8N9W5 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
DNAAF3Q8N9W5 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.97■□□□□ 0.95
DNAAF3Q8N9W5 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
DNAAF3Q8N9W5 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
DNAAF3Q8N9W5 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
DNAAF3Q8N9W5 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.97■□□□□ 0.95
DNAAF3Q8N9W5 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.97■□□□□ 0.95
DNAAF3Q8N9W5 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
DNAAF3Q8N9W5 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.97■□□□□ 0.95
DNAAF3Q8N9W5 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
DNAAF3Q8N9W5 LINC01006-201ENST00000333319 2292 ntBASIC20.97■□□□□ 0.95
DNAAF3Q8N9W5 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.96■□□□□ 0.95
DNAAF3Q8N9W5 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
DNAAF3Q8N9W5 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
DNAAF3Q8N9W5 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
DNAAF3Q8N9W5 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms