Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 AC027702.1-201ENST00000563810 1770 ntBASIC16.78■□□□□ 0.28
LINC00311Q8N616 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
LINC00311Q8N616 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LINC00311Q8N616 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
LINC00311Q8N616 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC16.78■□□□□ 0.28
LINC00311Q8N616 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
LINC00311Q8N616 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LINC00311Q8N616 AC007225.1-201ENST00000566331 1836 ntBASIC16.77■□□□□ 0.28
LINC00311Q8N616 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LINC00311Q8N616 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC16.77■□□□□ 0.28
LINC00311Q8N616 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LINC00311Q8N616 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LINC00311Q8N616 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
LINC00311Q8N616 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC16.77■□□□□ 0.28
LINC00311Q8N616 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
LINC00311Q8N616 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LINC00311Q8N616 ME3-201ENST00000323418 1068 ntTSL 5 BASIC16.77■□□□□ 0.28
LINC00311Q8N616 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
LINC00311Q8N616 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
LINC00311Q8N616 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC16.77■□□□□ 0.28
LINC00311Q8N616 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LINC00311Q8N616 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LINC00311Q8N616 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC16.77■□□□□ 0.28
LINC00311Q8N616 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
LINC00311Q8N616 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LINC00311Q8N616 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
LINC00311Q8N616 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LINC00311Q8N616 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC16.77■□□□□ 0.27
LINC00311Q8N616 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.27
LINC00311Q8N616 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LINC00311Q8N616 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
LINC00311Q8N616 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
LINC00311Q8N616 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LINC00311Q8N616 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LINC00311Q8N616 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
LINC00311Q8N616 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC16.76■□□□□ 0.27
LINC00311Q8N616 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
LINC00311Q8N616 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC16.76■□□□□ 0.27
LINC00311Q8N616 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC16.76■□□□□ 0.27
LINC00311Q8N616 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC16.76■□□□□ 0.27
LINC00311Q8N616 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC16.76■□□□□ 0.27
LINC00311Q8N616 AC013268.1-206ENST00000638368 961 ntBASIC16.76■□□□□ 0.27
LINC00311Q8N616 AC112229.1-201ENST00000639295 961 ntBASIC16.76■□□□□ 0.27
LINC00311Q8N616 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
LINC00311Q8N616 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC16.76■□□□□ 0.27
LINC00311Q8N616 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
LINC00311Q8N616 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
LINC00311Q8N616 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LINC00311Q8N616 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
LINC00311Q8N616 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LINC00311Q8N616 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LINC00311Q8N616 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC16.76■□□□□ 0.27
LINC00311Q8N616 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LINC00311Q8N616 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
LINC00311Q8N616 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LINC00311Q8N616 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC16.75■□□□□ 0.27
LINC00311Q8N616 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LINC00311Q8N616 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
LINC00311Q8N616 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC16.75■□□□□ 0.27
LINC00311Q8N616 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
LINC00311Q8N616 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LINC00311Q8N616 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
LINC00311Q8N616 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LINC00311Q8N616 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LINC00311Q8N616 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC16.75■□□□□ 0.27
LINC00311Q8N616 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
LINC00311Q8N616 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
LINC00311Q8N616 MFSD11-216ENST00000590393 1141 ntBASIC16.75■□□□□ 0.27
LINC00311Q8N616 AL591742.1-201ENST00000604433 565 ntBASIC16.75■□□□□ 0.27
LINC00311Q8N616 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
LINC00311Q8N616 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LINC00311Q8N616 ME2-216ENST00000639850 2331 ntTSL 5 BASIC16.75■□□□□ 0.27
LINC00311Q8N616 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LINC00311Q8N616 GAS2L1P2-201ENST00000436355 1356 ntBASIC16.75■□□□□ 0.27
LINC00311Q8N616 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LINC00311Q8N616 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
LINC00311Q8N616 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
LINC00311Q8N616 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LINC00311Q8N616 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LINC00311Q8N616 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LINC00311Q8N616 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
LINC00311Q8N616 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
LINC00311Q8N616 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LINC00311Q8N616 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC16.74■□□□□ 0.27
LINC00311Q8N616 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LINC00311Q8N616 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LINC00311Q8N616 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LINC00311Q8N616 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
LINC00311Q8N616 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
LINC00311Q8N616 UQCRFS1P1-201ENST00000435169 820 ntBASIC16.74■□□□□ 0.27
LINC00311Q8N616 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC16.74■□□□□ 0.27
LINC00311Q8N616 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LINC00311Q8N616 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LINC00311Q8N616 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC16.74■□□□□ 0.27
LINC00311Q8N616 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
LINC00311Q8N616 FAM21FP-204ENST00000608637 956 ntBASIC16.74■□□□□ 0.27
LINC00311Q8N616 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
LINC00311Q8N616 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LINC00311Q8N616 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC16.73■□□□□ 0.27
LINC00311Q8N616 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms