Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 AC008694.1-202ENST00000636953 945 ntBASIC22.02■■□□□ 1.12
TTC39CQ8N584 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TTC39CQ8N584 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TTC39CQ8N584 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
TTC39CQ8N584 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TTC39CQ8N584 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TTC39CQ8N584 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC22.02■■□□□ 1.11
TTC39CQ8N584 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC22.01■■□□□ 1.11
TTC39CQ8N584 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TTC39CQ8N584 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC22.01■■□□□ 1.11
TTC39CQ8N584 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
TTC39CQ8N584 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
TTC39CQ8N584 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
TTC39CQ8N584 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC22.01■■□□□ 1.11
TTC39CQ8N584 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
TTC39CQ8N584 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TTC39CQ8N584 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC22.01■■□□□ 1.11
TTC39CQ8N584 PLLP-204ENST00000569059 665 ntTSL 3 BASIC22.01■■□□□ 1.11
TTC39CQ8N584 RAP2CP1-201ENST00000605103 478 ntBASIC22.01■■□□□ 1.11
TTC39CQ8N584 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
TTC39CQ8N584 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
TTC39CQ8N584 AF106564.1-201ENST00000607058 2553 ntBASIC22.01■■□□□ 1.11
TTC39CQ8N584 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC22.01■■□□□ 1.11
TTC39CQ8N584 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TTC39CQ8N584 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
TTC39CQ8N584 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC22.01■■□□□ 1.11
TTC39CQ8N584 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
TTC39CQ8N584 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC22■■□□□ 1.11
TTC39CQ8N584 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TTC39CQ8N584 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
TTC39CQ8N584 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC22■■□□□ 1.11
TTC39CQ8N584 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC22■■□□□ 1.11
TTC39CQ8N584 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC22■■□□□ 1.11
TTC39CQ8N584 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC22■■□□□ 1.11
TTC39CQ8N584 AC005181.1-201ENST00000604782 1256 ntBASIC22■■□□□ 1.11
TTC39CQ8N584 MAZ-216ENST00000616501 991 ntTSL 5 BASIC22■■□□□ 1.11
TTC39CQ8N584 OR10C1-204ENST00000622521 1039 ntBASIC22■■□□□ 1.11
TTC39CQ8N584 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TTC39CQ8N584 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC22■■□□□ 1.11
TTC39CQ8N584 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
TTC39CQ8N584 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC22■■□□□ 1.11
TTC39CQ8N584 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC22■■□□□ 1.11
TTC39CQ8N584 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TTC39CQ8N584 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.99■■□□□ 1.11
TTC39CQ8N584 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
TTC39CQ8N584 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
TTC39CQ8N584 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC21.99■■□□□ 1.11
TTC39CQ8N584 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TTC39CQ8N584 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
TTC39CQ8N584 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TTC39CQ8N584 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TTC39CQ8N584 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TTC39CQ8N584 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TTC39CQ8N584 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.99■■□□□ 1.11
TTC39CQ8N584 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.99■■□□□ 1.11
TTC39CQ8N584 RARRES2P4-201ENST00000514074 484 ntBASIC21.99■■□□□ 1.11
TTC39CQ8N584 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.99■■□□□ 1.11
TTC39CQ8N584 AC100791.3-201ENST00000617619 330 ntBASIC21.99■■□□□ 1.11
TTC39CQ8N584 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
TTC39CQ8N584 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TTC39CQ8N584 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
TTC39CQ8N584 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.99■■□□□ 1.11
TTC39CQ8N584 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
TTC39CQ8N584 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.98■■□□□ 1.11
TTC39CQ8N584 CYP2T1P-201ENST00000432607 1285 ntBASIC21.98■■□□□ 1.11
TTC39CQ8N584 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.98■■□□□ 1.11
TTC39CQ8N584 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.98■■□□□ 1.11
TTC39CQ8N584 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
TTC39CQ8N584 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
TTC39CQ8N584 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TTC39CQ8N584 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
TTC39CQ8N584 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.98■■□□□ 1.11
TTC39CQ8N584 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC21.98■■□□□ 1.11
TTC39CQ8N584 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
TTC39CQ8N584 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.97■■□□□ 1.11
TTC39CQ8N584 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
TTC39CQ8N584 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.97■■□□□ 1.11
TTC39CQ8N584 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
TTC39CQ8N584 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
TTC39CQ8N584 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.97■■□□□ 1.11
TTC39CQ8N584 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
TTC39CQ8N584 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
TTC39CQ8N584 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.97■■□□□ 1.11
TTC39CQ8N584 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.97■■□□□ 1.11
TTC39CQ8N584 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.97■■□□□ 1.11
TTC39CQ8N584 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
TTC39CQ8N584 AC133552.2-202ENST00000575694 574 ntBASIC21.97■■□□□ 1.11
TTC39CQ8N584 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
TTC39CQ8N584 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.97■■□□□ 1.11
TTC39CQ8N584 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.97■■□□□ 1.11
TTC39CQ8N584 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
TTC39CQ8N584 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TTC39CQ8N584 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.97■■□□□ 1.11
TTC39CQ8N584 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
TTC39CQ8N584 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
TTC39CQ8N584 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.97■■□□□ 1.11
TTC39CQ8N584 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TTC39CQ8N584 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
TTC39CQ8N584 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TTC39CQ8N584 AC005229.4-201ENST00000610085 2198 ntBASIC21.97■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms