Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
PGBD3Q8N328 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PGBD3Q8N328 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21■□□□□ 0.95
PGBD3Q8N328 BAALC-201ENST00000297574 801 ntTSL 3 BASIC21■□□□□ 0.95
PGBD3Q8N328 AC091799.1-201ENST00000422823 811 ntBASIC21■□□□□ 0.95
PGBD3Q8N328 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC21■□□□□ 0.95
PGBD3Q8N328 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC21■□□□□ 0.95
PGBD3Q8N328 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21■□□□□ 0.95
PGBD3Q8N328 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
PGBD3Q8N328 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21■□□□□ 0.95
PGBD3Q8N328 UNC93B5-201ENST00000530315 699 ntBASIC21■□□□□ 0.95
PGBD3Q8N328 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21■□□□□ 0.95
PGBD3Q8N328 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PGBD3Q8N328 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PGBD3Q8N328 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
PGBD3Q8N328 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PGBD3Q8N328 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.99■□□□□ 0.95
PGBD3Q8N328 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PGBD3Q8N328 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.99■□□□□ 0.95
PGBD3Q8N328 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PGBD3Q8N328 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
PGBD3Q8N328 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PGBD3Q8N328 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.99■□□□□ 0.95
PGBD3Q8N328 AP003097.1-201ENST00000530657 1135 ntBASIC20.99■□□□□ 0.95
PGBD3Q8N328 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.99■□□□□ 0.95
PGBD3Q8N328 FAM21FP-204ENST00000608637 956 ntBASIC20.99■□□□□ 0.95
PGBD3Q8N328 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.99■□□□□ 0.95
PGBD3Q8N328 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PGBD3Q8N328 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PGBD3Q8N328 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.98■□□□□ 0.95
PGBD3Q8N328 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
PGBD3Q8N328 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
PGBD3Q8N328 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
PGBD3Q8N328 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PGBD3Q8N328 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
PGBD3Q8N328 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
PGBD3Q8N328 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.98■□□□□ 0.95
PGBD3Q8N328 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.98■□□□□ 0.95
PGBD3Q8N328 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.98■□□□□ 0.95
PGBD3Q8N328 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.98■□□□□ 0.95
PGBD3Q8N328 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PGBD3Q8N328 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PGBD3Q8N328 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
PGBD3Q8N328 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.98■□□□□ 0.95
PGBD3Q8N328 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PGBD3Q8N328 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PGBD3Q8N328 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
PGBD3Q8N328 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PGBD3Q8N328 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
PGBD3Q8N328 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PGBD3Q8N328 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PGBD3Q8N328 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
PGBD3Q8N328 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.97■□□□□ 0.95
PGBD3Q8N328 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.97■□□□□ 0.95
PGBD3Q8N328 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PGBD3Q8N328 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.97■□□□□ 0.95
PGBD3Q8N328 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.97■□□□□ 0.95
PGBD3Q8N328 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.97■□□□□ 0.95
PGBD3Q8N328 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PGBD3Q8N328 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
PGBD3Q8N328 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PGBD3Q8N328 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.97■□□□□ 0.95
PGBD3Q8N328 C11orf96-202ENST00000528572 1834 ntBASIC20.97■□□□□ 0.95
PGBD3Q8N328 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
PGBD3Q8N328 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PGBD3Q8N328 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PGBD3Q8N328 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PGBD3Q8N328 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.96■□□□□ 0.95
PGBD3Q8N328 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PGBD3Q8N328 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PGBD3Q8N328 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
PGBD3Q8N328 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.96■□□□□ 0.95
PGBD3Q8N328 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.96■□□□□ 0.95
PGBD3Q8N328 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
PGBD3Q8N328 CYP2T3P-201ENST00000601990 817 ntBASIC20.96■□□□□ 0.95
PGBD3Q8N328 AC073648.6-201ENST00000641589 218 ntBASIC20.96■□□□□ 0.95
PGBD3Q8N328 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PGBD3Q8N328 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
PGBD3Q8N328 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PGBD3Q8N328 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
PGBD3Q8N328 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.95
PGBD3Q8N328 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PGBD3Q8N328 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
PGBD3Q8N328 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PGBD3Q8N328 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PGBD3Q8N328 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PGBD3Q8N328 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PGBD3Q8N328 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.95■□□□□ 0.94
PGBD3Q8N328 RPS2P4-201ENST00000476944 856 ntBASIC20.95■□□□□ 0.94
PGBD3Q8N328 UNC93B4-201ENST00000505679 747 ntBASIC20.95■□□□□ 0.94
PGBD3Q8N328 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.95■□□□□ 0.94
PGBD3Q8N328 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PGBD3Q8N328 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.95■□□□□ 0.94
PGBD3Q8N328 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PGBD3Q8N328 AL589743.5-201ENST00000616611 1050 ntBASIC20.95■□□□□ 0.94
PGBD3Q8N328 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PGBD3Q8N328 AC026471.6-201ENST00000622954 1905 ntBASIC20.95■□□□□ 0.94
PGBD3Q8N328 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PGBD3Q8N328 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
PGBD3Q8N328 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms