Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TMEFF1Q8IYR6 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.61■□□□□ 0.89
TMEFF1Q8IYR6 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.61■□□□□ 0.89
TMEFF1Q8IYR6 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
TMEFF1Q8IYR6 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.61■□□□□ 0.89
TMEFF1Q8IYR6 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
TMEFF1Q8IYR6 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.61■□□□□ 0.89
TMEFF1Q8IYR6 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TMEFF1Q8IYR6 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.6■□□□□ 0.89
TMEFF1Q8IYR6 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMEFF1Q8IYR6 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
TMEFF1Q8IYR6 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TMEFF1Q8IYR6 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.6■□□□□ 0.89
TMEFF1Q8IYR6 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMEFF1Q8IYR6 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.6■□□□□ 0.89
TMEFF1Q8IYR6 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMEFF1Q8IYR6 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TMEFF1Q8IYR6 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMEFF1Q8IYR6 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMEFF1Q8IYR6 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.6■□□□□ 0.89
TMEFF1Q8IYR6 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TMEFF1Q8IYR6 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.6■□□□□ 0.89
TMEFF1Q8IYR6 AC073912.3-201ENST00000624414 853 ntBASIC20.6■□□□□ 0.89
TMEFF1Q8IYR6 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TMEFF1Q8IYR6 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.6■□□□□ 0.89
TMEFF1Q8IYR6 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
TMEFF1Q8IYR6 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEFF1Q8IYR6 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.59■□□□□ 0.89
TMEFF1Q8IYR6 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEFF1Q8IYR6 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TMEFF1Q8IYR6 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TMEFF1Q8IYR6 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEFF1Q8IYR6 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEFF1Q8IYR6 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
TMEFF1Q8IYR6 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEFF1Q8IYR6 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.59■□□□□ 0.89
TMEFF1Q8IYR6 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEFF1Q8IYR6 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TMEFF1Q8IYR6 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TMEFF1Q8IYR6 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TMEFF1Q8IYR6 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TMEFF1Q8IYR6 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEFF1Q8IYR6 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEFF1Q8IYR6 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEFF1Q8IYR6 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEFF1Q8IYR6 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEFF1Q8IYR6 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEFF1Q8IYR6 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.59■□□□□ 0.89
TMEFF1Q8IYR6 AC080038.3-201ENST00000623346 1952 ntBASIC20.59■□□□□ 0.89
TMEFF1Q8IYR6 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEFF1Q8IYR6 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEFF1Q8IYR6 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TMEFF1Q8IYR6 CYP21A1P-202ENST00000354927 1481 ntBASIC20.58■□□□□ 0.89
TMEFF1Q8IYR6 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TMEFF1Q8IYR6 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TMEFF1Q8IYR6 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TMEFF1Q8IYR6 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TMEFF1Q8IYR6 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
TMEFF1Q8IYR6 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TMEFF1Q8IYR6 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.58■□□□□ 0.89
TMEFF1Q8IYR6 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
TMEFF1Q8IYR6 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.58■□□□□ 0.89
TMEFF1Q8IYR6 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.58■□□□□ 0.88
TMEFF1Q8IYR6 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TMEFF1Q8IYR6 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
TMEFF1Q8IYR6 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TMEFF1Q8IYR6 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMEFF1Q8IYR6 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
TMEFF1Q8IYR6 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.57■□□□□ 0.88
TMEFF1Q8IYR6 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TMEFF1Q8IYR6 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMEFF1Q8IYR6 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.57■□□□□ 0.88
TMEFF1Q8IYR6 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.57■□□□□ 0.88
TMEFF1Q8IYR6 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMEFF1Q8IYR6 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMEFF1Q8IYR6 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TMEFF1Q8IYR6 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TMEFF1Q8IYR6 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
TMEFF1Q8IYR6 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMEFF1Q8IYR6 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.57■□□□□ 0.88
TMEFF1Q8IYR6 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
TMEFF1Q8IYR6 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
TMEFF1Q8IYR6 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
TMEFF1Q8IYR6 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.57■□□□□ 0.88
TMEFF1Q8IYR6 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.57■□□□□ 0.88
TMEFF1Q8IYR6 REXO1L12P-201ENST00000622156 912 ntBASIC20.57■□□□□ 0.88
TMEFF1Q8IYR6 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.57■□□□□ 0.88
TMEFF1Q8IYR6 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMEFF1Q8IYR6 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMEFF1Q8IYR6 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.57■□□□□ 0.88
TMEFF1Q8IYR6 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMEFF1Q8IYR6 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMEFF1Q8IYR6 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
TMEFF1Q8IYR6 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.56■□□□□ 0.88
TMEFF1Q8IYR6 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TMEFF1Q8IYR6 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMEFF1Q8IYR6 AC233723.2-201ENST00000623798 2106 ntBASIC20.56■□□□□ 0.88
TMEFF1Q8IYR6 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMEFF1Q8IYR6 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMEFF1Q8IYR6 AC211429.1-201ENST00000415277 523 ntBASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms