Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC25.66■■□□□ 1.7
SMC5Q8IY18 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SMC5Q8IY18 COX20-201ENST00000366528 568 ntTSL 2 BASIC25.66■■□□□ 1.7
SMC5Q8IY18 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
SMC5Q8IY18 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
SMC5Q8IY18 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC25.66■■□□□ 1.7
SMC5Q8IY18 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
SMC5Q8IY18 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
SMC5Q8IY18 DET1-207ENST00000564406 2315 ntTSL 2 BASIC25.66■■□□□ 1.7
SMC5Q8IY18 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC25.66■■□□□ 1.7
SMC5Q8IY18 AL162377.1-201ENST00000618844 1793 ntBASIC25.66■■□□□ 1.7
SMC5Q8IY18 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SMC5Q8IY18 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC25.66■■□□□ 1.7
SMC5Q8IY18 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SMC5Q8IY18 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC25.66■■□□□ 1.7
SMC5Q8IY18 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC25.65■■□□□ 1.7
SMC5Q8IY18 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SMC5Q8IY18 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
SMC5Q8IY18 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
SMC5Q8IY18 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC25.65■■□□□ 1.7
SMC5Q8IY18 AL121603.2-201ENST00000557373 2117 ntBASIC25.65■■□□□ 1.7
SMC5Q8IY18 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC25.65■■□□□ 1.7
SMC5Q8IY18 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC25.65■■□□□ 1.7
SMC5Q8IY18 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC25.65■■□□□ 1.7
SMC5Q8IY18 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SMC5Q8IY18 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SMC5Q8IY18 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
SMC5Q8IY18 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SMC5Q8IY18 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
SMC5Q8IY18 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
SMC5Q8IY18 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
SMC5Q8IY18 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
SMC5Q8IY18 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC25.64■■□□□ 1.7
SMC5Q8IY18 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
SMC5Q8IY18 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
SMC5Q8IY18 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.7
SMC5Q8IY18 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
SMC5Q8IY18 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
SMC5Q8IY18 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.7
SMC5Q8IY18 TESC-206ENST00000541210 936 ntTSL 3 BASIC25.64■■□□□ 1.7
SMC5Q8IY18 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC25.64■■□□□ 1.7
SMC5Q8IY18 AC120498.10-201ENST00000621827 505 ntBASIC25.64■■□□□ 1.7
SMC5Q8IY18 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
SMC5Q8IY18 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
SMC5Q8IY18 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
SMC5Q8IY18 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
SMC5Q8IY18 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
SMC5Q8IY18 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC25.64■■□□□ 1.69
SMC5Q8IY18 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SMC5Q8IY18 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC25.63■■□□□ 1.69
SMC5Q8IY18 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SMC5Q8IY18 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
SMC5Q8IY18 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SMC5Q8IY18 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SMC5Q8IY18 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC25.63■■□□□ 1.69
SMC5Q8IY18 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
SMC5Q8IY18 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC25.63■■□□□ 1.69
SMC5Q8IY18 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC25.63■■□□□ 1.69
SMC5Q8IY18 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SMC5Q8IY18 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
SMC5Q8IY18 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC25.63■■□□□ 1.69
SMC5Q8IY18 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
SMC5Q8IY18 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SMC5Q8IY18 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SMC5Q8IY18 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SMC5Q8IY18 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
SMC5Q8IY18 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SMC5Q8IY18 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
SMC5Q8IY18 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
SMC5Q8IY18 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
SMC5Q8IY18 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
SMC5Q8IY18 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
SMC5Q8IY18 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
SMC5Q8IY18 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC25.62■■□□□ 1.69
SMC5Q8IY18 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
SMC5Q8IY18 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC25.62■■□□□ 1.69
SMC5Q8IY18 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
SMC5Q8IY18 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC25.62■■□□□ 1.69
SMC5Q8IY18 SLC7A5P1-201ENST00000568957 537 ntBASIC25.62■■□□□ 1.69
SMC5Q8IY18 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC25.62■■□□□ 1.69
SMC5Q8IY18 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC25.62■■□□□ 1.69
SMC5Q8IY18 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
SMC5Q8IY18 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC25.62■■□□□ 1.69
SMC5Q8IY18 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SMC5Q8IY18 PTPA-214ENST00000423100 988 ntTSL 2 BASIC25.61■■□□□ 1.69
SMC5Q8IY18 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC25.61■■□□□ 1.69
SMC5Q8IY18 FGF8-207ENST00000618991 856 ntTSL 3 BASIC25.61■■□□□ 1.69
SMC5Q8IY18 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
SMC5Q8IY18 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SMC5Q8IY18 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SMC5Q8IY18 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
SMC5Q8IY18 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
SMC5Q8IY18 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC25.61■■□□□ 1.69
SMC5Q8IY18 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC25.61■■□□□ 1.69
SMC5Q8IY18 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC25.61■■□□□ 1.69
SMC5Q8IY18 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
SMC5Q8IY18 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
SMC5Q8IY18 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
SMC5Q8IY18 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC25.6■■□□□ 1.69
SMC5Q8IY18 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms