Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
LINC00346Q8IVM7 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
LINC00346Q8IVM7 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
LINC00346Q8IVM7 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LINC00346Q8IVM7 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LINC00346Q8IVM7 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
LINC00346Q8IVM7 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LINC00346Q8IVM7 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.26■□□□□ 0.51
LINC00346Q8IVM7 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
LINC00346Q8IVM7 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
LINC00346Q8IVM7 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.26■□□□□ 0.51
LINC00346Q8IVM7 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
LINC00346Q8IVM7 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
LINC00346Q8IVM7 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.26■□□□□ 0.51
LINC00346Q8IVM7 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LINC00346Q8IVM7 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.26■□□□□ 0.51
LINC00346Q8IVM7 AC138907.5-202ENST00000569484 235 ntBASIC18.26■□□□□ 0.51
LINC00346Q8IVM7 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.26■□□□□ 0.51
LINC00346Q8IVM7 AC104187.1-201ENST00000607510 612 ntBASIC18.26■□□□□ 0.51
LINC00346Q8IVM7 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
LINC00346Q8IVM7 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LINC00346Q8IVM7 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.26■□□□□ 0.51
LINC00346Q8IVM7 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.26■□□□□ 0.51
LINC00346Q8IVM7 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LINC00346Q8IVM7 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
LINC00346Q8IVM7 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
LINC00346Q8IVM7 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LINC00346Q8IVM7 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
LINC00346Q8IVM7 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
LINC00346Q8IVM7 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
LINC00346Q8IVM7 SLC25A24-204ENST00000569674 2357 ntBASIC18.25■□□□□ 0.51
LINC00346Q8IVM7 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LINC00346Q8IVM7 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.25■□□□□ 0.51
LINC00346Q8IVM7 AC073314.1-201ENST00000568729 2216 ntBASIC18.25■□□□□ 0.51
LINC00346Q8IVM7 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
LINC00346Q8IVM7 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.25■□□□□ 0.51
LINC00346Q8IVM7 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.25■□□□□ 0.51
LINC00346Q8IVM7 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LINC00346Q8IVM7 AC123595.1-201ENST00000440769 1046 ntBASIC18.25■□□□□ 0.51
LINC00346Q8IVM7 YBX1P1-201ENST00000445822 960 ntBASIC18.25■□□□□ 0.51
LINC00346Q8IVM7 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LINC00346Q8IVM7 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LINC00346Q8IVM7 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
LINC00346Q8IVM7 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LINC00346Q8IVM7 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LINC00346Q8IVM7 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.25■□□□□ 0.51
LINC00346Q8IVM7 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LINC00346Q8IVM7 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LINC00346Q8IVM7 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
LINC00346Q8IVM7 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LINC00346Q8IVM7 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LINC00346Q8IVM7 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LINC00346Q8IVM7 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LINC00346Q8IVM7 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LINC00346Q8IVM7 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.24■□□□□ 0.51
LINC00346Q8IVM7 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LINC00346Q8IVM7 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.24■□□□□ 0.51
LINC00346Q8IVM7 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.24■□□□□ 0.51
LINC00346Q8IVM7 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LINC00346Q8IVM7 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.24■□□□□ 0.51
LINC00346Q8IVM7 AC010141.2-201ENST00000452426 721 ntBASIC18.24■□□□□ 0.51
LINC00346Q8IVM7 CCDC92B-201ENST00000575506 885 ntBASIC18.24■□□□□ 0.51
LINC00346Q8IVM7 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.24■□□□□ 0.51
LINC00346Q8IVM7 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
LINC00346Q8IVM7 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LINC00346Q8IVM7 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LINC00346Q8IVM7 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LINC00346Q8IVM7 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LINC00346Q8IVM7 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.23■□□□□ 0.51
LINC00346Q8IVM7 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
LINC00346Q8IVM7 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
LINC00346Q8IVM7 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LINC00346Q8IVM7 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LINC00346Q8IVM7 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
LINC00346Q8IVM7 FP700111.2-201ENST00000619190 1892 ntBASIC18.23■□□□□ 0.51
LINC00346Q8IVM7 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.23■□□□□ 0.51
LINC00346Q8IVM7 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
LINC00346Q8IVM7 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.23■□□□□ 0.51
LINC00346Q8IVM7 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.23■□□□□ 0.51
LINC00346Q8IVM7 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.23■□□□□ 0.51
LINC00346Q8IVM7 TERF1P2-201ENST00000583350 1212 ntBASIC18.23■□□□□ 0.51
LINC00346Q8IVM7 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
LINC00346Q8IVM7 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.23■□□□□ 0.51
LINC00346Q8IVM7 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.23■□□□□ 0.51
LINC00346Q8IVM7 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
LINC00346Q8IVM7 AC007225.1-201ENST00000566331 1836 ntBASIC18.23■□□□□ 0.51
LINC00346Q8IVM7 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LINC00346Q8IVM7 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.23■□□□□ 0.51
LINC00346Q8IVM7 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LINC00346Q8IVM7 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.23■□□□□ 0.51
LINC00346Q8IVM7 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
LINC00346Q8IVM7 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LINC00346Q8IVM7 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.22■□□□□ 0.51
LINC00346Q8IVM7 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
LINC00346Q8IVM7 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
LINC00346Q8IVM7 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LINC00346Q8IVM7 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LINC00346Q8IVM7 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LINC00346Q8IVM7 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.22■□□□□ 0.51
LINC00346Q8IVM7 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms