Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
LYSMD2Q8IV50 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LYSMD2Q8IV50 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.15■□□□□ 0.5
LYSMD2Q8IV50 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.15■□□□□ 0.5
LYSMD2Q8IV50 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LYSMD2Q8IV50 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
LYSMD2Q8IV50 AC004987.1-201ENST00000428627 508 ntBASIC18.15■□□□□ 0.5
LYSMD2Q8IV50 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LYSMD2Q8IV50 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.15■□□□□ 0.5
LYSMD2Q8IV50 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LYSMD2Q8IV50 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LYSMD2Q8IV50 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LYSMD2Q8IV50 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.15■□□□□ 0.5
LYSMD2Q8IV50 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LYSMD2Q8IV50 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LYSMD2Q8IV50 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LYSMD2Q8IV50 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LYSMD2Q8IV50 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LYSMD2Q8IV50 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LYSMD2Q8IV50 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.15■□□□□ 0.5
LYSMD2Q8IV50 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LYSMD2Q8IV50 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LYSMD2Q8IV50 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LYSMD2Q8IV50 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.14■□□□□ 0.5
LYSMD2Q8IV50 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LYSMD2Q8IV50 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.14■□□□□ 0.49
LYSMD2Q8IV50 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.14■□□□□ 0.49
LYSMD2Q8IV50 ATP5G2P3-201ENST00000429083 425 ntBASIC18.14■□□□□ 0.49
LYSMD2Q8IV50 MIR4508-201ENST00000584178 70 ntBASIC18.14■□□□□ 0.49
LYSMD2Q8IV50 NTF6A-201ENST00000591175 560 ntBASIC18.14■□□□□ 0.49
LYSMD2Q8IV50 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.14■□□□□ 0.49
LYSMD2Q8IV50 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LYSMD2Q8IV50 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
LYSMD2Q8IV50 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LYSMD2Q8IV50 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
LYSMD2Q8IV50 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
LYSMD2Q8IV50 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.14■□□□□ 0.49
LYSMD2Q8IV50 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LYSMD2Q8IV50 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18.14■□□□□ 0.49
LYSMD2Q8IV50 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LYSMD2Q8IV50 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
LYSMD2Q8IV50 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LYSMD2Q8IV50 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LYSMD2Q8IV50 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LYSMD2Q8IV50 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.13■□□□□ 0.49
LYSMD2Q8IV50 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
LYSMD2Q8IV50 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.13■□□□□ 0.49
LYSMD2Q8IV50 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC18.13■□□□□ 0.49
LYSMD2Q8IV50 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LYSMD2Q8IV50 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LYSMD2Q8IV50 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC18.13■□□□□ 0.49
LYSMD2Q8IV50 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LYSMD2Q8IV50 CLTA-210ENST00000540080 989 ntTSL 2 BASIC18.13■□□□□ 0.49
LYSMD2Q8IV50 HSD17B1P1-201ENST00000590052 955 ntBASIC18.13■□□□□ 0.49
LYSMD2Q8IV50 AC137630.3-201ENST00000607245 391 ntBASIC18.13■□□□□ 0.49
LYSMD2Q8IV50 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LYSMD2Q8IV50 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LYSMD2Q8IV50 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LYSMD2Q8IV50 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LYSMD2Q8IV50 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LYSMD2Q8IV50 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.13■□□□□ 0.49
LYSMD2Q8IV50 AC005332.7-201ENST00000614046 2005 ntBASIC18.13■□□□□ 0.49
LYSMD2Q8IV50 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LYSMD2Q8IV50 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LYSMD2Q8IV50 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LYSMD2Q8IV50 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LYSMD2Q8IV50 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.12■□□□□ 0.49
LYSMD2Q8IV50 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LYSMD2Q8IV50 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
LYSMD2Q8IV50 AC007613.1-201ENST00000572811 2597 ntBASIC18.12■□□□□ 0.49
LYSMD2Q8IV50 AC005332.8-201ENST00000622750 2735 ntBASIC18.12■□□□□ 0.49
LYSMD2Q8IV50 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.12■□□□□ 0.49
LYSMD2Q8IV50 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.12■□□□□ 0.49
LYSMD2Q8IV50 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.12■□□□□ 0.49
LYSMD2Q8IV50 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LYSMD2Q8IV50 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
LYSMD2Q8IV50 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC18.12■□□□□ 0.49
LYSMD2Q8IV50 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
LYSMD2Q8IV50 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.12■□□□□ 0.49
LYSMD2Q8IV50 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LYSMD2Q8IV50 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
LYSMD2Q8IV50 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
LYSMD2Q8IV50 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
LYSMD2Q8IV50 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LYSMD2Q8IV50 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
LYSMD2Q8IV50 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LYSMD2Q8IV50 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.11■□□□□ 0.49
LYSMD2Q8IV50 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LYSMD2Q8IV50 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LYSMD2Q8IV50 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LYSMD2Q8IV50 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC18.11■□□□□ 0.49
LYSMD2Q8IV50 CLTA-206ENST00000466396 695 ntTSL 2 BASIC18.11■□□□□ 0.49
LYSMD2Q8IV50 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
LYSMD2Q8IV50 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.11■□□□□ 0.49
LYSMD2Q8IV50 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LYSMD2Q8IV50 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.11■□□□□ 0.49
LYSMD2Q8IV50 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
LYSMD2Q8IV50 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.11■□□□□ 0.49
LYSMD2Q8IV50 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
LYSMD2Q8IV50 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms