Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC22.31■■□□□ 1.16
NPAS4Q8IUM7 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
NPAS4Q8IUM7 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
NPAS4Q8IUM7 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
NPAS4Q8IUM7 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
NPAS4Q8IUM7 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
NPAS4Q8IUM7 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
NPAS4Q8IUM7 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC22.31■■□□□ 1.16
NPAS4Q8IUM7 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC22.3■■□□□ 1.16
NPAS4Q8IUM7 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
NPAS4Q8IUM7 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC22.3■■□□□ 1.16
NPAS4Q8IUM7 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
NPAS4Q8IUM7 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC22.3■■□□□ 1.16
NPAS4Q8IUM7 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
NPAS4Q8IUM7 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
NPAS4Q8IUM7 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC22.3■■□□□ 1.16
NPAS4Q8IUM7 C2orf69P4-201ENST00000565394 541 ntBASIC22.3■■□□□ 1.16
NPAS4Q8IUM7 SPIB-206ENST00000596074 847 ntTSL 2 BASIC22.3■■□□□ 1.16
NPAS4Q8IUM7 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC22.3■■□□□ 1.16
NPAS4Q8IUM7 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
NPAS4Q8IUM7 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC22.3■■□□□ 1.16
NPAS4Q8IUM7 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
NPAS4Q8IUM7 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC22.29■■□□□ 1.16
NPAS4Q8IUM7 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
NPAS4Q8IUM7 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
NPAS4Q8IUM7 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
NPAS4Q8IUM7 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
NPAS4Q8IUM7 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC22.29■■□□□ 1.16
NPAS4Q8IUM7 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC22.29■■□□□ 1.16
NPAS4Q8IUM7 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC22.29■■□□□ 1.16
NPAS4Q8IUM7 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
NPAS4Q8IUM7 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
NPAS4Q8IUM7 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC22.29■■□□□ 1.16
NPAS4Q8IUM7 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
NPAS4Q8IUM7 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
NPAS4Q8IUM7 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
NPAS4Q8IUM7 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
NPAS4Q8IUM7 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC22.29■■□□□ 1.16
NPAS4Q8IUM7 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
NPAS4Q8IUM7 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC22.28■■□□□ 1.16
NPAS4Q8IUM7 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
NPAS4Q8IUM7 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
NPAS4Q8IUM7 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC22.28■■□□□ 1.16
NPAS4Q8IUM7 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
NPAS4Q8IUM7 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
NPAS4Q8IUM7 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC22.28■■□□□ 1.16
NPAS4Q8IUM7 MIR4497-201ENST00000583208 89 ntBASIC22.28■■□□□ 1.16
NPAS4Q8IUM7 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
NPAS4Q8IUM7 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC22.28■■□□□ 1.16
NPAS4Q8IUM7 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
NPAS4Q8IUM7 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
NPAS4Q8IUM7 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
NPAS4Q8IUM7 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
NPAS4Q8IUM7 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.27■■□□□ 1.16
NPAS4Q8IUM7 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
NPAS4Q8IUM7 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
NPAS4Q8IUM7 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC22.27■■□□□ 1.16
NPAS4Q8IUM7 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC22.27■■□□□ 1.16
NPAS4Q8IUM7 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
NPAS4Q8IUM7 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
NPAS4Q8IUM7 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
NPAS4Q8IUM7 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
NPAS4Q8IUM7 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC22.27■■□□□ 1.16
NPAS4Q8IUM7 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
NPAS4Q8IUM7 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
NPAS4Q8IUM7 AC087633.2-202ENST00000565166 1439 ntBASIC22.27■■□□□ 1.16
NPAS4Q8IUM7 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
NPAS4Q8IUM7 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
NPAS4Q8IUM7 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
NPAS4Q8IUM7 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC22.26■■□□□ 1.15
NPAS4Q8IUM7 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
NPAS4Q8IUM7 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
NPAS4Q8IUM7 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
NPAS4Q8IUM7 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
NPAS4Q8IUM7 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
NPAS4Q8IUM7 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
NPAS4Q8IUM7 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
NPAS4Q8IUM7 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
NPAS4Q8IUM7 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC22.26■■□□□ 1.15
NPAS4Q8IUM7 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
NPAS4Q8IUM7 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC22.26■■□□□ 1.15
NPAS4Q8IUM7 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC22.26■■□□□ 1.15
NPAS4Q8IUM7 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC22.26■■□□□ 1.15
NPAS4Q8IUM7 KLF2-202ENST00000592003 564 ntTSL 3 BASIC22.26■■□□□ 1.15
NPAS4Q8IUM7 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
NPAS4Q8IUM7 Z99916.2-201ENST00000604037 246 ntBASIC22.26■■□□□ 1.15
NPAS4Q8IUM7 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC22.26■■□□□ 1.15
NPAS4Q8IUM7 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
NPAS4Q8IUM7 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
NPAS4Q8IUM7 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
NPAS4Q8IUM7 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
NPAS4Q8IUM7 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC22.26■■□□□ 1.15
NPAS4Q8IUM7 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
NPAS4Q8IUM7 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
NPAS4Q8IUM7 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
NPAS4Q8IUM7 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
NPAS4Q8IUM7 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
NPAS4Q8IUM7 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
NPAS4Q8IUM7 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC22.25■■□□□ 1.15
NPAS4Q8IUM7 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC22.25■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms