Protein–RNA interactions for Protein: Q86WB0

ZC3HC1, Nuclear-interacting partner of ALK, humanhuman

Known RBP Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1Q86WB0 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.55■□□□□ 0.88
ZC3HC1Q86WB0 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
ZC3HC1Q86WB0 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.55■□□□□ 0.88
ZC3HC1Q86WB0 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZC3HC1Q86WB0 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.55■□□□□ 0.88
ZC3HC1Q86WB0 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ZC3HC1Q86WB0 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZC3HC1Q86WB0 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ZC3HC1Q86WB0 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ZC3HC1Q86WB0 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ZC3HC1Q86WB0 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ZC3HC1Q86WB0 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
ZC3HC1Q86WB0 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZC3HC1Q86WB0 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ZC3HC1Q86WB0 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.54■□□□□ 0.88
ZC3HC1Q86WB0 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
ZC3HC1Q86WB0 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZC3HC1Q86WB0 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZC3HC1Q86WB0 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ZC3HC1Q86WB0 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.54■□□□□ 0.88
ZC3HC1Q86WB0 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZC3HC1Q86WB0 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ZC3HC1Q86WB0 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ZC3HC1Q86WB0 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZC3HC1Q86WB0 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZC3HC1Q86WB0 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZC3HC1Q86WB0 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.54■□□□□ 0.88
ZC3HC1Q86WB0 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.54■□□□□ 0.88
ZC3HC1Q86WB0 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZC3HC1Q86WB0 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZC3HC1Q86WB0 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ZC3HC1Q86WB0 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.53■□□□□ 0.88
ZC3HC1Q86WB0 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.53■□□□□ 0.88
ZC3HC1Q86WB0 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZC3HC1Q86WB0 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ZC3HC1Q86WB0 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZC3HC1Q86WB0 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ZC3HC1Q86WB0 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.53■□□□□ 0.88
ZC3HC1Q86WB0 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.53■□□□□ 0.88
ZC3HC1Q86WB0 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ZC3HC1Q86WB0 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.53■□□□□ 0.88
ZC3HC1Q86WB0 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.53■□□□□ 0.88
ZC3HC1Q86WB0 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZC3HC1Q86WB0 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ZC3HC1Q86WB0 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
ZC3HC1Q86WB0 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
ZC3HC1Q86WB0 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.53■□□□□ 0.88
ZC3HC1Q86WB0 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
ZC3HC1Q86WB0 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
ZC3HC1Q86WB0 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
ZC3HC1Q86WB0 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZC3HC1Q86WB0 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
ZC3HC1Q86WB0 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZC3HC1Q86WB0 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ZC3HC1Q86WB0 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZC3HC1Q86WB0 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZC3HC1Q86WB0 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.52■□□□□ 0.88
ZC3HC1Q86WB0 AC123595.1-201ENST00000440769 1046 ntBASIC20.52■□□□□ 0.88
ZC3HC1Q86WB0 AC245052.3-201ENST00000450182 901 ntBASIC20.52■□□□□ 0.88
ZC3HC1Q86WB0 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
ZC3HC1Q86WB0 AC104187.1-201ENST00000607510 612 ntBASIC20.52■□□□□ 0.88
ZC3HC1Q86WB0 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZC3HC1Q86WB0 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
ZC3HC1Q86WB0 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZC3HC1Q86WB0 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
ZC3HC1Q86WB0 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
ZC3HC1Q86WB0 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
ZC3HC1Q86WB0 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
ZC3HC1Q86WB0 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZC3HC1Q86WB0 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZC3HC1Q86WB0 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ZC3HC1Q86WB0 DUX4L2-201ENST00000561772 1275 ntBASIC20.51■□□□□ 0.87
ZC3HC1Q86WB0 TERF1P2-201ENST00000583350 1212 ntBASIC20.51■□□□□ 0.87
ZC3HC1Q86WB0 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.51■□□□□ 0.87
ZC3HC1Q86WB0 AC120498.10-201ENST00000621827 505 ntBASIC20.51■□□□□ 0.87
ZC3HC1Q86WB0 DUX4L6-201ENST00000626483 1275 ntBASIC20.51■□□□□ 0.87
ZC3HC1Q86WB0 DUX4L1-201ENST00000627662 1275 ntBASIC20.51■□□□□ 0.87
ZC3HC1Q86WB0 DUX4L8-201ENST00000629013 1275 ntBASIC20.51■□□□□ 0.87
ZC3HC1Q86WB0 DUX4L3-201ENST00000630187 1275 ntBASIC20.51■□□□□ 0.87
ZC3HC1Q86WB0 DUX4L7-201ENST00000630678 1275 ntBASIC20.51■□□□□ 0.87
ZC3HC1Q86WB0 DUX4L5-201ENST00000630834 1275 ntBASIC20.51■□□□□ 0.87
ZC3HC1Q86WB0 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ZC3HC1Q86WB0 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.51■□□□□ 0.87
ZC3HC1Q86WB0 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
ZC3HC1Q86WB0 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
ZC3HC1Q86WB0 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.51■□□□□ 0.87
ZC3HC1Q86WB0 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
ZC3HC1Q86WB0 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
ZC3HC1Q86WB0 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
ZC3HC1Q86WB0 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.5■□□□□ 0.87
ZC3HC1Q86WB0 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ZC3HC1Q86WB0 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
ZC3HC1Q86WB0 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.5■□□□□ 0.87
ZC3HC1Q86WB0 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
ZC3HC1Q86WB0 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.5■□□□□ 0.87
ZC3HC1Q86WB0 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
ZC3HC1Q86WB0 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
ZC3HC1Q86WB0 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
ZC3HC1Q86WB0 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.5■□□□□ 0.87
ZC3HC1Q86WB0 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms