Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
KRT40Q6A162 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
KRT40Q6A162 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
KRT40Q6A162 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
KRT40Q6A162 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC23.94■■□□□ 1.42
KRT40Q6A162 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC23.94■■□□□ 1.42
KRT40Q6A162 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
KRT40Q6A162 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC23.94■■□□□ 1.42
KRT40Q6A162 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
KRT40Q6A162 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
KRT40Q6A162 KRT19P1-201ENST00000405746 1186 ntBASIC23.94■■□□□ 1.42
KRT40Q6A162 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
KRT40Q6A162 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC23.94■■□□□ 1.42
KRT40Q6A162 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
KRT40Q6A162 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
KRT40Q6A162 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
KRT40Q6A162 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC23.93■■□□□ 1.42
KRT40Q6A162 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
KRT40Q6A162 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
KRT40Q6A162 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
KRT40Q6A162 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC23.93■■□□□ 1.42
KRT40Q6A162 AC006970.2-201ENST00000450065 779 ntBASIC23.93■■□□□ 1.42
KRT40Q6A162 DBI-210ENST00000542275 757 ntTSL 5 BASIC23.93■■□□□ 1.42
KRT40Q6A162 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC23.93■■□□□ 1.42
KRT40Q6A162 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
KRT40Q6A162 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
KRT40Q6A162 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
KRT40Q6A162 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
KRT40Q6A162 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC23.93■■□□□ 1.42
KRT40Q6A162 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
KRT40Q6A162 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC23.92■■□□□ 1.42
KRT40Q6A162 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
KRT40Q6A162 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
KRT40Q6A162 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
KRT40Q6A162 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC23.92■■□□□ 1.42
KRT40Q6A162 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC23.92■■□□□ 1.42
KRT40Q6A162 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC23.92■■□□□ 1.42
KRT40Q6A162 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC23.92■■□□□ 1.42
KRT40Q6A162 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC23.92■■□□□ 1.42
KRT40Q6A162 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC23.92■■□□□ 1.42
KRT40Q6A162 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
KRT40Q6A162 AL157384.1-201ENST00000445995 2473 ntBASIC23.92■■□□□ 1.42
KRT40Q6A162 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC23.92■■□□□ 1.42
KRT40Q6A162 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
KRT40Q6A162 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
KRT40Q6A162 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
KRT40Q6A162 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC23.91■■□□□ 1.42
KRT40Q6A162 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
KRT40Q6A162 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
KRT40Q6A162 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
KRT40Q6A162 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
KRT40Q6A162 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
KRT40Q6A162 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
KRT40Q6A162 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
KRT40Q6A162 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
KRT40Q6A162 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
KRT40Q6A162 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
KRT40Q6A162 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
KRT40Q6A162 TSPY20P-201ENST00000450910 630 ntBASIC23.91■■□□□ 1.42
KRT40Q6A162 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC23.91■■□□□ 1.42
KRT40Q6A162 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
KRT40Q6A162 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
KRT40Q6A162 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
KRT40Q6A162 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
KRT40Q6A162 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC23.91■■□□□ 1.42
KRT40Q6A162 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC23.91■■□□□ 1.42
KRT40Q6A162 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
KRT40Q6A162 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
KRT40Q6A162 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
KRT40Q6A162 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
KRT40Q6A162 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
KRT40Q6A162 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
KRT40Q6A162 HSCB-202ENST00000398941 955 ntTSL 2 BASIC23.9■■□□□ 1.42
KRT40Q6A162 AC245052.3-201ENST00000450182 901 ntBASIC23.9■■□□□ 1.42
KRT40Q6A162 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
KRT40Q6A162 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
KRT40Q6A162 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC23.9■■□□□ 1.42
KRT40Q6A162 WT1-AS_3.1-201ENST00000613262 234 ntBASIC23.9■■□□□ 1.42
KRT40Q6A162 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC23.9■■□□□ 1.42
KRT40Q6A162 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
KRT40Q6A162 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
KRT40Q6A162 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC23.9■■□□□ 1.42
KRT40Q6A162 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC23.9■■□□□ 1.42
KRT40Q6A162 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
KRT40Q6A162 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
KRT40Q6A162 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
KRT40Q6A162 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
KRT40Q6A162 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
KRT40Q6A162 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
KRT40Q6A162 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC23.89■■□□□ 1.42
KRT40Q6A162 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
KRT40Q6A162 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC23.89■■□□□ 1.42
KRT40Q6A162 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC23.89■■□□□ 1.42
KRT40Q6A162 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
KRT40Q6A162 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
KRT40Q6A162 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
KRT40Q6A162 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
KRT40Q6A162 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
KRT40Q6A162 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC23.89■■□□□ 1.41
KRT40Q6A162 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC23.89■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms