Protein–RNA interactions for Protein: Q08685

CLP1, mRNA cleavage and polyadenylation factor CLP1, yeastyeast

Predicted RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CLP1Q08685 UTP5YDR398W 1932 nt2.29□□□□□ -2.04
CLP1Q08685 FAB1YFR019W 6837 nt2.28□□□□□ -2.04
CLP1Q08685 TUS1YLR425W 3924 nt2.28□□□□□ -2.04
CLP1Q08685 SAP185YJL098W 3177 nt2.28□□□□□ -2.04
CLP1Q08685 STH1YIL126W 4080 nt2.28□□□□□ -2.04
CLP1Q08685 YOL098CYOL098C 3114 nt2.28□□□□□ -2.04
CLP1Q08685 DPP1YDR284C 870 nt2.28□□□□□ -2.04
CLP1Q08685 RSM27YGR215W 333 nt2.28□□□□□ -2.04
CLP1Q08685 BET3YKR068C 582 nt2.28□□□□□ -2.04
CLP1Q08685 SRL3YKR091W 741 nt2.28□□□□□ -2.04
CLP1Q08685 LIP2YLR239C 987 nt2.28□□□□□ -2.04
CLP1Q08685 SMD2YLR275W 333 nt2.28□□□□□ -2.04
CLP1Q08685 ADI1YMR009W 540 nt2.28□□□□□ -2.04
CLP1Q08685 IGO1YNL157W 507 nt2.28□□□□□ -2.04
CLP1Q08685 YOR366WYOR366W 354 nt2.28□□□□□ -2.04
CLP1Q08685 MED8YBR193C 672 nt2.28□□□□□ -2.04
CLP1Q08685 VMA9YCL005W-A 222 nt2.28□□□□□ -2.04
CLP1Q08685 SAG1YJR004C 1953 nt2.28□□□□□ -2.04
CLP1Q08685 KAP123YER110C 3342 nt2.28□□□□□ -2.04
CLP1Q08685 APC2YLR127C 2562 nt2.27□□□□□ -2.05
CLP1Q08685 GUK1YDR454C 564 nt2.27□□□□□ -2.05
CLP1Q08685 CAJ1YER048C 1176 nt2.27□□□□□ -2.05
CLP1Q08685 YFR010W-AYFR010W-A 189 nt2.27□□□□□ -2.05
CLP1Q08685 RPA12YJR063W 378 nt2.27□□□□□ -2.05
CLP1Q08685 YLR154W-AYLR154W-A 186 nt2.27□□□□□ -2.05
CLP1Q08685 RPS22BYLR367W 393 nt2.27□□□□□ -2.05
CLP1Q08685 SAS2YMR127C 1017 nt2.27□□□□□ -2.05
CLP1Q08685 YBL068W-AYBL068W-A 237 nt2.27□□□□□ -2.05
CLP1Q08685 MER1YNL210W 813 nt2.27□□□□□ -2.05
CLP1Q08685 SME1YOR159C 285 nt2.27□□□□□ -2.05
CLP1Q08685 GRX5YPL059W 453 nt2.27□□□□□ -2.05
CLP1Q08685 YRO2YBR054W 1035 nt2.27□□□□□ -2.05
CLP1Q08685 CUP9YPL177C 921 nt2.27□□□□□ -2.05
CLP1Q08685 MSS18YPR134W 807 nt2.27□□□□□ -2.05
CLP1Q08685 SVL3YPL032C 2478 nt2.27□□□□□ -2.05
CLP1Q08685 SLY41YOR307C 1362 nt2.26□□□□□ -2.05
CLP1Q08685 BNI1YNL271C 5862 nt2.26□□□□□ -2.05
CLP1Q08685 PCK1YKR097W 1650 nt2.26□□□□□ -2.05
CLP1Q08685 YCR099CYCR099C 468 nt2.26□□□□□ -2.05
CLP1Q08685 ATP16YDL004W 483 nt2.26□□□□□ -2.05
CLP1Q08685 HTB1YDR224C 396 nt2.26□□□□□ -2.05
CLP1Q08685 VMA10YHR039C-A 345 nt2.26□□□□□ -2.05
CLP1Q08685 RPC25YKL144C 639 nt2.26□□□□□ -2.05
CLP1Q08685 YOR203WYOR203W 354 nt2.26□□□□□ -2.05
CLP1Q08685 AIM4YBR194W 372 nt2.26□□□□□ -2.05
CLP1Q08685 BIT61YJL058C 1632 nt2.26□□□□□ -2.05
CLP1Q08685 SSQ1YLR369W 1974 nt2.26□□□□□ -2.05
CLP1Q08685 SNX41YDR425W 1878 nt2.26□□□□□ -2.05
CLP1Q08685 PEX5YDR244W 1839 nt2.26□□□□□ -2.05
CLP1Q08685 NPR3YHL023C 3441 nt2.26□□□□□ -2.05
CLP1Q08685 AI3Q0060 1248 nt2.25□□□□□ -2.05
CLP1Q08685 RPS17AYML024W 411 nt2.25□□□□□ -2.05
CLP1Q08685 BET5YML077W 480 nt2.25□□□□□ -2.05
CLP1Q08685 ALG14YBR070C 714 nt2.25□□□□□ -2.05
CLP1Q08685 MAM1YER106W 909 nt2.24□□□□□ -2.05
CLP1Q08685 SPR2YOR214C 711 nt2.24□□□□□ -2.05
CLP1Q08685 YPL135C-AYPL135C-A 174 nt2.24□□□□□ -2.05
CLP1Q08685 CIN2YPL241C 807 nt2.24□□□□□ -2.05
CLP1Q08685 BRE5YNR051C 1548 nt2.23□□□□□ -2.05
CLP1Q08685 YEL043WYEL043W 2871 nt2.23□□□□□ -2.05
CLP1Q08685 YDL158CYDL158C 309 nt2.23□□□□□ -2.05
CLP1Q08685 COBQ0105 1158 nt2.23□□□□□ -2.05
CLP1Q08685 PRE4YFR050C 801 nt2.23□□□□□ -2.05
CLP1Q08685 CTK2YJL006C 972 nt2.23□□□□□ -2.05
CLP1Q08685 YJL156W-AYJL156W-A 222 nt2.23□□□□□ -2.05
CLP1Q08685 NNF1YJR112W 606 nt2.23□□□□□ -2.05
CLP1Q08685 ATP7YKL016C 525 nt2.23□□□□□ -2.05
CLP1Q08685 GPX1YKL026C 504 nt2.23□□□□□ -2.05
CLP1Q08685 RPL36AYMR194W 303 nt2.23□□□□□ -2.05
CLP1Q08685 RSA1YPL193W 1146 nt2.23□□□□□ -2.05
CLP1Q08685 UTP22YGR090W 3714 nt2.23□□□□□ -2.05
CLP1Q08685 MSL5YLR116W 1431 nt2.23□□□□□ -2.05
CLP1Q08685 ALY1YKR021W 2748 nt2.23□□□□□ -2.05
CLP1Q08685 snR76snR76 109 nt2.22□□□□□ -2.05
CLP1Q08685 TVP15YDR100W 432 nt2.22□□□□□ -2.05
CLP1Q08685 FMN1YDR236C 657 nt2.22□□□□□ -2.05
CLP1Q08685 SDC1YDR469W 528 nt2.22□□□□□ -2.05
CLP1Q08685 YFL012WYFL012W 447 nt2.22□□□□□ -2.05
CLP1Q08685 COG7YGL005C 840 nt2.22□□□□□ -2.05
CLP1Q08685 GTR2YGR163W 1026 nt2.22□□□□□ -2.05
CLP1Q08685 SPO11YHL022C 1197 nt2.22□□□□□ -2.05
CLP1Q08685 YKL069WYKL069W 543 nt2.22□□□□□ -2.05
CLP1Q08685 RNP1YLL046C 750 nt2.22□□□□□ -2.05
CLP1Q08685 RPS30AYLR287C-A 192 nt2.22□□□□□ -2.05
CLP1Q08685 PDR17YNL264C 1053 nt2.22□□□□□ -2.05
CLP1Q08685 MGE1YOR232W 687 nt2.22□□□□□ -2.05
CLP1Q08685 YBR090CYBR090C 369 nt2.22□□□□□ -2.05
CLP1Q08685 YBR201C-AYBR201C-A 204 nt2.22□□□□□ -2.05
CLP1Q08685 MCD1YDL003W 1701 nt2.22□□□□□ -2.05
CLP1Q08685 ATC1YDR184C 885 nt2.21□□□□□ -2.06
CLP1Q08685 MFA1YDR461W 111 nt2.21□□□□□ -2.06
CLP1Q08685 RPS24AYER074W 408 nt2.21□□□□□ -2.06
CLP1Q08685 SEC4YFL005W 648 nt2.21□□□□□ -2.06
CLP1Q08685 BRP1YGL007W 378 nt2.21□□□□□ -2.06
CLP1Q08685 UPF3YGR072W 1164 nt2.21□□□□□ -2.06
CLP1Q08685 BTN2YGR142W 1233 nt2.21□□□□□ -2.06
CLP1Q08685 YHL002C-AYHL002C-A 489 nt2.21□□□□□ -2.06
CLP1Q08685 YHR071C-AYHR071C-A 321 nt2.21□□□□□ -2.06
CLP1Q08685 VPH2YKL119C 648 nt2.21□□□□□ -2.06
CLP1Q08685 VPS51YKR020W 495 nt2.21□□□□□ -2.06
Retrieved 100 of 7,029 protein–RNA pairs in 101.6 ms