Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SRPXP78539 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SRPXP78539 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SRPXP78539 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SRPXP78539 SRD5A1P1-201ENST00000442297 786 ntBASIC17.02■□□□□ 0.32
SRPXP78539 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.32
SRPXP78539 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SRPXP78539 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC17.02■□□□□ 0.32
SRPXP78539 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC17.02■□□□□ 0.32
SRPXP78539 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.02■□□□□ 0.32
SRPXP78539 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SRPXP78539 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SRPXP78539 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SRPXP78539 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
SRPXP78539 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SRPXP78539 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
SRPXP78539 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.02■□□□□ 0.31
SRPXP78539 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SRPXP78539 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.01■□□□□ 0.31
SRPXP78539 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.01■□□□□ 0.31
SRPXP78539 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SRPXP78539 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SRPXP78539 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SRPXP78539 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SRPXP78539 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC17.01■□□□□ 0.31
SRPXP78539 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC17.01■□□□□ 0.31
SRPXP78539 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC17.01■□□□□ 0.31
SRPXP78539 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
SRPXP78539 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SRPXP78539 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SRPXP78539 FP700111.2-201ENST00000619190 1892 ntBASIC17.01■□□□□ 0.31
SRPXP78539 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SRPXP78539 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SRPXP78539 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.01■□□□□ 0.31
SRPXP78539 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SRPXP78539 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
SRPXP78539 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC17■□□□□ 0.31
SRPXP78539 BID-204ENST00000399767 2129 ntTSL 2 BASIC17■□□□□ 0.31
SRPXP78539 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SRPXP78539 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC17■□□□□ 0.31
SRPXP78539 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17■□□□□ 0.31
SRPXP78539 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC17■□□□□ 0.31
SRPXP78539 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SRPXP78539 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SRPXP78539 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SRPXP78539 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17■□□□□ 0.31
SRPXP78539 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC17■□□□□ 0.31
SRPXP78539 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC17■□□□□ 0.31
SRPXP78539 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
SRPXP78539 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17■□□□□ 0.31
SRPXP78539 AL356740.2-201ENST00000601559 647 ntBASIC17■□□□□ 0.31
SRPXP78539 AL138724.1-201ENST00000606771 1088 ntBASIC17■□□□□ 0.31
SRPXP78539 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17■□□□□ 0.31
SRPXP78539 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17■□□□□ 0.31
SRPXP78539 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
SRPXP78539 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC17■□□□□ 0.31
SRPXP78539 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SRPXP78539 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
SRPXP78539 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC16.99■□□□□ 0.31
SRPXP78539 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SRPXP78539 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
SRPXP78539 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SRPXP78539 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
SRPXP78539 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC16.99■□□□□ 0.31
SRPXP78539 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC16.99■□□□□ 0.31
SRPXP78539 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SRPXP78539 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SRPXP78539 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
SRPXP78539 AL512408.1-201ENST00000569378 2000 ntBASIC16.99■□□□□ 0.31
SRPXP78539 RNF165-205ENST00000588679 2904 ntBASIC16.99■□□□□ 0.31
SRPXP78539 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SRPXP78539 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
SRPXP78539 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC16.99■□□□□ 0.31
SRPXP78539 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SRPXP78539 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC16.99■□□□□ 0.31
SRPXP78539 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.99■□□□□ 0.31
SRPXP78539 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SRPXP78539 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SRPXP78539 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SRPXP78539 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SRPXP78539 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC16.98■□□□□ 0.31
SRPXP78539 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC16.98■□□□□ 0.31
SRPXP78539 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SRPXP78539 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
SRPXP78539 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SRPXP78539 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC16.98■□□□□ 0.31
SRPXP78539 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
SRPXP78539 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SRPXP78539 PCDHAC2-203ENST00000615316 3011 ntBASIC16.98■□□□□ 0.31
SRPXP78539 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC16.98■□□□□ 0.31
SRPXP78539 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
SRPXP78539 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SRPXP78539 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SRPXP78539 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC16.98■□□□□ 0.31
SRPXP78539 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SRPXP78539 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SRPXP78539 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SRPXP78539 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.98■□□□□ 0.31
SRPXP78539 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SRPXP78539 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms