Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCK1P35558 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCK1P35558 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
PCK1P35558 KRT18P20-201ENST00000548986 1279 ntBASIC21.7■■□□□ 1.06
PCK1P35558 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCK1P35558 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC21.7■■□□□ 1.06
PCK1P35558 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
PCK1P35558 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCK1P35558 PLK5-205ENST00000642079 1969 ntBASIC21.7■■□□□ 1.06
PCK1P35558 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.7■■□□□ 1.06
PCK1P35558 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCK1P35558 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PCK1P35558 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCK1P35558 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.69■■□□□ 1.06
PCK1P35558 AC121338.2-201ENST00000622535 1744 ntBASIC21.69■■□□□ 1.06
PCK1P35558 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.69■■□□□ 1.06
PCK1P35558 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCK1P35558 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.69■■□□□ 1.06
PCK1P35558 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCK1P35558 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCK1P35558 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.69■■□□□ 1.06
PCK1P35558 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCK1P35558 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.69■■□□□ 1.06
PCK1P35558 AC097381.1-201ENST00000429019 1296 ntBASIC21.69■■□□□ 1.06
PCK1P35558 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCK1P35558 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
PCK1P35558 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
PCK1P35558 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCK1P35558 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
PCK1P35558 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.69■■□□□ 1.06
PCK1P35558 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.69■■□□□ 1.06
PCK1P35558 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCK1P35558 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PCK1P35558 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
PCK1P35558 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PCK1P35558 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCK1P35558 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
PCK1P35558 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
PCK1P35558 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCK1P35558 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
PCK1P35558 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.68■■□□□ 1.06
PCK1P35558 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCK1P35558 AC006128.1-201ENST00000624704 1661 ntBASIC21.68■■□□□ 1.06
PCK1P35558 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCK1P35558 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
PCK1P35558 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCK1P35558 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCK1P35558 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCK1P35558 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCK1P35558 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
PCK1P35558 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
PCK1P35558 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.67■■□□□ 1.06
PCK1P35558 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCK1P35558 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCK1P35558 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.67■■□□□ 1.06
PCK1P35558 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCK1P35558 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
PCK1P35558 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PCK1P35558 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PCK1P35558 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCK1P35558 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.67■■□□□ 1.06
PCK1P35558 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.67■■□□□ 1.06
PCK1P35558 RARRES2P11-201ENST00000635158 484 ntBASIC21.67■■□□□ 1.06
PCK1P35558 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCK1P35558 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCK1P35558 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCK1P35558 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCK1P35558 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
PCK1P35558 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PCK1P35558 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
PCK1P35558 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
PCK1P35558 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCK1P35558 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
PCK1P35558 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.66■■□□□ 1.06
PCK1P35558 SLC7A5P2-201ENST00000553010 536 ntBASIC21.66■■□□□ 1.06
PCK1P35558 KRT18P61-201ENST00000585825 1298 ntBASIC21.66■■□□□ 1.06
PCK1P35558 MIR6821-201ENST00000617625 74 ntBASIC21.66■■□□□ 1.06
PCK1P35558 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCK1P35558 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PCK1P35558 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCK1P35558 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCK1P35558 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PCK1P35558 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.66■■□□□ 1.06
PCK1P35558 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCK1P35558 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.66■■□□□ 1.06
PCK1P35558 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
PCK1P35558 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PCK1P35558 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCK1P35558 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCK1P35558 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCK1P35558 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCK1P35558 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.65■■□□□ 1.06
PCK1P35558 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCK1P35558 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCK1P35558 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCK1P35558 KRT19P1-201ENST00000405746 1186 ntBASIC21.65■■□□□ 1.06
PCK1P35558 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.65■■□□□ 1.06
PCK1P35558 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.65■■□□□ 1.06
PCK1P35558 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCK1P35558 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms