Protein–RNA interactions for Protein: P35247

SFTPD, Pulmonary surfactant-associated protein D, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPDP35247 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
SFTPDP35247 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
SFTPDP35247 AL049796.1-201ENST00000565336 1766 ntBASIC18.71■□□□□ 0.59
SFTPDP35247 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SFTPDP35247 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SFTPDP35247 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.71■□□□□ 0.59
SFTPDP35247 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.71■□□□□ 0.59
SFTPDP35247 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SFTPDP35247 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.71■□□□□ 0.59
SFTPDP35247 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
SFTPDP35247 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.71■□□□□ 0.59
SFTPDP35247 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SFTPDP35247 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SFTPDP35247 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SFTPDP35247 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
SFTPDP35247 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
SFTPDP35247 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.7■□□□□ 0.58
SFTPDP35247 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SFTPDP35247 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.7■□□□□ 0.58
SFTPDP35247 AC007322.1-201ENST00000426983 750 ntBASIC18.7■□□□□ 0.58
SFTPDP35247 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SFTPDP35247 CDCA4P2-201ENST00000441182 718 ntBASIC18.7■□□□□ 0.58
SFTPDP35247 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.7■□□□□ 0.58
SFTPDP35247 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.7■□□□□ 0.58
SFTPDP35247 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SFTPDP35247 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.7■□□□□ 0.58
SFTPDP35247 AC243732.1-201ENST00000612648 864 ntBASIC18.7■□□□□ 0.58
SFTPDP35247 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.7■□□□□ 0.58
SFTPDP35247 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.7■□□□□ 0.58
SFTPDP35247 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SFTPDP35247 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SFTPDP35247 AC231657.2-201ENST00000624556 255 ntBASIC18.7■□□□□ 0.58
SFTPDP35247 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SFTPDP35247 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SFTPDP35247 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SFTPDP35247 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
SFTPDP35247 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SFTPDP35247 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.69■□□□□ 0.58
SFTPDP35247 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SFTPDP35247 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SFTPDP35247 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.69■□□□□ 0.58
SFTPDP35247 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
SFTPDP35247 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SFTPDP35247 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SFTPDP35247 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
SFTPDP35247 CNN2P6-201ENST00000439038 900 ntBASIC18.69■□□□□ 0.58
SFTPDP35247 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SFTPDP35247 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.69■□□□□ 0.58
SFTPDP35247 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
SFTPDP35247 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SFTPDP35247 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SFTPDP35247 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
SFTPDP35247 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.69■□□□□ 0.58
SFTPDP35247 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.69■□□□□ 0.58
SFTPDP35247 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SFTPDP35247 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
SFTPDP35247 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SFTPDP35247 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SFTPDP35247 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SFTPDP35247 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SFTPDP35247 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.68■□□□□ 0.58
SFTPDP35247 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.68■□□□□ 0.58
SFTPDP35247 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SFTPDP35247 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.68■□□□□ 0.58
SFTPDP35247 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SFTPDP35247 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
SFTPDP35247 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SFTPDP35247 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SFTPDP35247 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
SFTPDP35247 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.68■□□□□ 0.58
SFTPDP35247 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SFTPDP35247 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SFTPDP35247 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SFTPDP35247 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SFTPDP35247 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.67■□□□□ 0.58
SFTPDP35247 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SFTPDP35247 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SFTPDP35247 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.67■□□□□ 0.58
SFTPDP35247 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SFTPDP35247 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SFTPDP35247 AC091799.1-201ENST00000422823 811 ntBASIC18.67■□□□□ 0.58
SFTPDP35247 AC026185.1-201ENST00000445748 174 ntBASIC18.67■□□□□ 0.58
SFTPDP35247 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.67■□□□□ 0.58
SFTPDP35247 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SFTPDP35247 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.67■□□□□ 0.58
SFTPDP35247 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SFTPDP35247 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SFTPDP35247 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.67■□□□□ 0.58
SFTPDP35247 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.67■□□□□ 0.58
SFTPDP35247 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SFTPDP35247 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SFTPDP35247 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
SFTPDP35247 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SFTPDP35247 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.66■□□□□ 0.58
SFTPDP35247 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.66■□□□□ 0.58
SFTPDP35247 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SFTPDP35247 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SFTPDP35247 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SFTPDP35247 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
SFTPDP35247 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms