Protein–RNA interactions for Protein: P31040

SDHA, Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP31040 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SDHAP31040 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SDHAP31040 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
SDHAP31040 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
SDHAP31040 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SDHAP31040 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SDHAP31040 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
SDHAP31040 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SDHAP31040 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SDHAP31040 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.5■□□□□ 0.55
SDHAP31040 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SDHAP31040 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
SDHAP31040 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.5■□□□□ 0.55
SDHAP31040 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.5■□□□□ 0.55
SDHAP31040 FP700111.2-201ENST00000619190 1892 ntBASIC18.5■□□□□ 0.55
SDHAP31040 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SDHAP31040 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SDHAP31040 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SDHAP31040 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SDHAP31040 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SDHAP31040 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.5■□□□□ 0.55
SDHAP31040 AC010141.2-201ENST00000452426 721 ntBASIC18.5■□□□□ 0.55
SDHAP31040 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SDHAP31040 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SDHAP31040 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.5■□□□□ 0.55
SDHAP31040 AC027702.1-201ENST00000563810 1770 ntBASIC18.5■□□□□ 0.55
SDHAP31040 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SDHAP31040 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SDHAP31040 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SDHAP31040 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SDHAP31040 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.5■□□□□ 0.55
SDHAP31040 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
SDHAP31040 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.49■□□□□ 0.55
SDHAP31040 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SDHAP31040 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SDHAP31040 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
SDHAP31040 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.49■□□□□ 0.55
SDHAP31040 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SDHAP31040 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.49■□□□□ 0.55
SDHAP31040 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SDHAP31040 AC245052.3-201ENST00000450182 901 ntBASIC18.49■□□□□ 0.55
SDHAP31040 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.49■□□□□ 0.55
SDHAP31040 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SDHAP31040 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SDHAP31040 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SDHAP31040 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SDHAP31040 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SDHAP31040 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.49■□□□□ 0.55
SDHAP31040 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SDHAP31040 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.48■□□□□ 0.55
SDHAP31040 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.48■□□□□ 0.55
SDHAP31040 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
SDHAP31040 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SDHAP31040 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.48■□□□□ 0.55
SDHAP31040 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SDHAP31040 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.48■□□□□ 0.55
SDHAP31040 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SDHAP31040 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SDHAP31040 AC123595.1-201ENST00000440769 1046 ntBASIC18.48■□□□□ 0.55
SDHAP31040 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.48■□□□□ 0.55
SDHAP31040 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
SDHAP31040 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.48■□□□□ 0.55
SDHAP31040 RARRES2P11-201ENST00000635158 484 ntBASIC18.48■□□□□ 0.55
SDHAP31040 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.48■□□□□ 0.55
SDHAP31040 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
SDHAP31040 RNF165-205ENST00000588679 2904 ntBASIC18.48■□□□□ 0.55
SDHAP31040 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
SDHAP31040 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
SDHAP31040 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SDHAP31040 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
SDHAP31040 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.48■□□□□ 0.55
SDHAP31040 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.48■□□□□ 0.55
SDHAP31040 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SDHAP31040 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
SDHAP31040 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.47■□□□□ 0.55
SDHAP31040 AC020907.5-201ENST00000624372 1936 ntBASIC18.47■□□□□ 0.55
SDHAP31040 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SDHAP31040 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
SDHAP31040 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SDHAP31040 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SDHAP31040 DUX4L2-201ENST00000561772 1275 ntBASIC18.47■□□□□ 0.55
SDHAP31040 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.47■□□□□ 0.55
SDHAP31040 DUX4L6-201ENST00000626483 1275 ntBASIC18.47■□□□□ 0.55
SDHAP31040 DUX4L1-201ENST00000627662 1275 ntBASIC18.47■□□□□ 0.55
SDHAP31040 DUX4L8-201ENST00000629013 1275 ntBASIC18.47■□□□□ 0.55
SDHAP31040 DUX4L3-201ENST00000630187 1275 ntBASIC18.47■□□□□ 0.55
SDHAP31040 DUX4L7-201ENST00000630678 1275 ntBASIC18.47■□□□□ 0.55
SDHAP31040 DUX4L5-201ENST00000630834 1275 ntBASIC18.47■□□□□ 0.55
SDHAP31040 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SDHAP31040 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
SDHAP31040 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
SDHAP31040 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SDHAP31040 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.46■□□□□ 0.55
SDHAP31040 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SDHAP31040 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SDHAP31040 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
SDHAP31040 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SDHAP31040 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.46■□□□□ 0.55
SDHAP31040 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SDHAP31040 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms