Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.2■□□□□ 0.82
CDH3P22223 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.2■□□□□ 0.82
CDH3P22223 AC013268.1-206ENST00000638368 961 ntBASIC20.2■□□□□ 0.82
CDH3P22223 AC112229.1-201ENST00000639295 961 ntBASIC20.2■□□□□ 0.82
CDH3P22223 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDH3P22223 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDH3P22223 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDH3P22223 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CDH3P22223 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDH3P22223 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDH3P22223 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
CDH3P22223 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
CDH3P22223 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDH3P22223 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.19■□□□□ 0.82
CDH3P22223 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.19■□□□□ 0.82
CDH3P22223 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDH3P22223 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.19■□□□□ 0.82
CDH3P22223 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.19■□□□□ 0.82
CDH3P22223 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDH3P22223 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
CDH3P22223 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDH3P22223 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.18■□□□□ 0.82
CDH3P22223 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDH3P22223 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
CDH3P22223 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDH3P22223 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDH3P22223 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDH3P22223 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDH3P22223 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.18■□□□□ 0.82
CDH3P22223 CNN2P6-201ENST00000439038 900 ntBASIC20.18■□□□□ 0.82
CDH3P22223 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.18■□□□□ 0.82
CDH3P22223 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.18■□□□□ 0.82
CDH3P22223 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDH3P22223 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDH3P22223 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDH3P22223 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDH3P22223 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.18■□□□□ 0.82
CDH3P22223 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CDH3P22223 C11orf96-202ENST00000528572 1834 ntBASIC20.18■□□□□ 0.82
CDH3P22223 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
CDH3P22223 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDH3P22223 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDH3P22223 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDH3P22223 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CDH3P22223 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.17■□□□□ 0.82
CDH3P22223 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CDH3P22223 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.17■□□□□ 0.82
CDH3P22223 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.17■□□□□ 0.82
CDH3P22223 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDH3P22223 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CDH3P22223 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CDH3P22223 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.17■□□□□ 0.82
CDH3P22223 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.17■□□□□ 0.82
CDH3P22223 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDH3P22223 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDH3P22223 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.17■□□□□ 0.82
CDH3P22223 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.17■□□□□ 0.82
CDH3P22223 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDH3P22223 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.17■□□□□ 0.82
CDH3P22223 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CDH3P22223 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.16■□□□□ 0.82
CDH3P22223 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDH3P22223 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.16■□□□□ 0.82
CDH3P22223 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
CDH3P22223 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDH3P22223 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CDH3P22223 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDH3P22223 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CDH3P22223 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDH3P22223 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDH3P22223 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.16■□□□□ 0.82
CDH3P22223 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDH3P22223 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CDH3P22223 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDH3P22223 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDH3P22223 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.16■□□□□ 0.82
CDH3P22223 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDH3P22223 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
CDH3P22223 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDH3P22223 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDH3P22223 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDH3P22223 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDH3P22223 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDH3P22223 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDH3P22223 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDH3P22223 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.15■□□□□ 0.82
CDH3P22223 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDH3P22223 GPX1P1-201ENST00000388829 606 ntBASIC20.15■□□□□ 0.82
CDH3P22223 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.15■□□□□ 0.82
CDH3P22223 NCF1B-203ENST00000435988 1254 ntBASIC20.15■□□□□ 0.82
CDH3P22223 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.15■□□□□ 0.82
CDH3P22223 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.15■□□□□ 0.82
CDH3P22223 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.15■□□□□ 0.82
CDH3P22223 AL109923.1-201ENST00000618799 583 ntBASIC20.15■□□□□ 0.82
CDH3P22223 AL050303.2-201ENST00000619798 666 ntBASIC20.15■□□□□ 0.82
CDH3P22223 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CDH3P22223 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
CDH3P22223 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.15■□□□□ 0.82
CDH3P22223 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.15■□□□□ 0.82
CDH3P22223 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms