Protein–RNA interactions for Protein: P14651

HOXB3, Homeobox protein Hox-B3, humanhuman

Predicted RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3P14651 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.26■□□□□ 0.83
HOXB3P14651 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HOXB3P14651 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HOXB3P14651 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HOXB3P14651 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HOXB3P14651 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HOXB3P14651 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HOXB3P14651 MIPEPP3-201ENST00000412105 444 ntBASIC20.26■□□□□ 0.83
HOXB3P14651 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.26■□□□□ 0.83
HOXB3P14651 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HOXB3P14651 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
HOXB3P14651 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.26■□□□□ 0.83
HOXB3P14651 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.26■□□□□ 0.83
HOXB3P14651 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HOXB3P14651 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.26■□□□□ 0.83
HOXB3P14651 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.26■□□□□ 0.83
HOXB3P14651 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.26■□□□□ 0.83
HOXB3P14651 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
HOXB3P14651 MKRN4P-201ENST00000444706 1521 ntBASIC20.26■□□□□ 0.83
HOXB3P14651 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
HOXB3P14651 RBM17P2-201ENST00000616397 1405 ntBASIC20.26■□□□□ 0.83
HOXB3P14651 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.26■□□□□ 0.83
HOXB3P14651 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HOXB3P14651 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HOXB3P14651 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HOXB3P14651 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
HOXB3P14651 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.25■□□□□ 0.83
HOXB3P14651 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HOXB3P14651 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
HOXB3P14651 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HOXB3P14651 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
HOXB3P14651 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.25■□□□□ 0.83
HOXB3P14651 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.25■□□□□ 0.83
HOXB3P14651 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
HOXB3P14651 UNC93B5-201ENST00000530315 699 ntBASIC20.25■□□□□ 0.83
HOXB3P14651 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HOXB3P14651 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.25■□□□□ 0.83
HOXB3P14651 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HOXB3P14651 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.25■□□□□ 0.83
HOXB3P14651 OR10C1-204ENST00000622521 1039 ntBASIC20.25■□□□□ 0.83
HOXB3P14651 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HOXB3P14651 KRT16P2-201ENST00000414673 1423 ntBASIC20.25■□□□□ 0.83
HOXB3P14651 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
HOXB3P14651 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
HOXB3P14651 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
HOXB3P14651 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.25■□□□□ 0.83
HOXB3P14651 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HOXB3P14651 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
HOXB3P14651 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.24■□□□□ 0.83
HOXB3P14651 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HOXB3P14651 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.24■□□□□ 0.83
HOXB3P14651 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HOXB3P14651 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
HOXB3P14651 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.24■□□□□ 0.83
HOXB3P14651 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
HOXB3P14651 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HOXB3P14651 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.24■□□□□ 0.83
HOXB3P14651 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HOXB3P14651 NT5C-211ENST00000582170 653 ntTSL 3 BASIC20.24■□□□□ 0.83
HOXB3P14651 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.24■□□□□ 0.83
HOXB3P14651 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.24■□□□□ 0.83
HOXB3P14651 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HOXB3P14651 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HOXB3P14651 AC008694.1-202ENST00000636953 945 ntBASIC20.24■□□□□ 0.83
HOXB3P14651 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.24■□□□□ 0.83
HOXB3P14651 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.24■□□□□ 0.83
HOXB3P14651 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.24■□□□□ 0.83
HOXB3P14651 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.23■□□□□ 0.83
HOXB3P14651 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HOXB3P14651 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.23■□□□□ 0.83
HOXB3P14651 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HOXB3P14651 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.23■□□□□ 0.83
HOXB3P14651 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HOXB3P14651 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HOXB3P14651 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HOXB3P14651 AC069236.1-201ENST00000604339 616 ntBASIC20.23■□□□□ 0.83
HOXB3P14651 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
HOXB3P14651 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.23■□□□□ 0.83
HOXB3P14651 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HOXB3P14651 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.23■□□□□ 0.83
HOXB3P14651 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.22■□□□□ 0.83
HOXB3P14651 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HOXB3P14651 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.22■□□□□ 0.83
HOXB3P14651 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
HOXB3P14651 ARMC10P1-201ENST00000313754 855 ntBASIC20.22■□□□□ 0.83
HOXB3P14651 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
HOXB3P14651 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
HOXB3P14651 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.22■□□□□ 0.83
HOXB3P14651 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.22■□□□□ 0.83
HOXB3P14651 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HOXB3P14651 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.22■□□□□ 0.83
HOXB3P14651 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
HOXB3P14651 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.22■□□□□ 0.83
HOXB3P14651 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HOXB3P14651 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.22■□□□□ 0.83
HOXB3P14651 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
HOXB3P14651 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
HOXB3P14651 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.22■□□□□ 0.83
HOXB3P14651 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
HOXB3P14651 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms