Protein–RNA interactions for Protein: P11831

SRF, Serum response factor, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFP11831 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC21.15■□□□□ 0.98
SRFP11831 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC21.15■□□□□ 0.98
SRFP11831 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SRFP11831 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
SRFP11831 AC113410.3-201ENST00000623366 203 ntBASIC21.15■□□□□ 0.98
SRFP11831 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SRFP11831 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SRFP11831 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SRFP11831 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SRFP11831 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
SRFP11831 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SRFP11831 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SRFP11831 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SRFP11831 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
SRFP11831 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
SRFP11831 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SRFP11831 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
SRFP11831 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SRFP11831 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC21.14■□□□□ 0.97
SRFP11831 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC21.14■□□□□ 0.97
SRFP11831 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC21.14■□□□□ 0.97
SRFP11831 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SRFP11831 AC012306.2-201ENST00000609350 630 ntBASIC21.14■□□□□ 0.97
SRFP11831 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
SRFP11831 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SRFP11831 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.14■□□□□ 0.97
SRFP11831 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
SRFP11831 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SRFP11831 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
SRFP11831 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SRFP11831 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SRFP11831 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SRFP11831 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SRFP11831 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SRFP11831 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SRFP11831 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
SRFP11831 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SRFP11831 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
SRFP11831 KRASP1-201ENST00000407852 552 ntBASIC21.13■□□□□ 0.97
SRFP11831 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC21.13■□□□□ 0.97
SRFP11831 TSPY15P-201ENST00000457163 923 ntBASIC21.13■□□□□ 0.97
SRFP11831 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC21.13■□□□□ 0.97
SRFP11831 RARRES2P10-201ENST00000564312 460 ntBASIC21.13■□□□□ 0.97
SRFP11831 SNX21-213ENST00000614929 587 ntTSL 5 BASIC21.13■□□□□ 0.97
SRFP11831 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
SRFP11831 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SRFP11831 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
SRFP11831 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SRFP11831 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SRFP11831 RCN1P1-201ENST00000400413 996 ntBASIC21.12■□□□□ 0.97
SRFP11831 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SRFP11831 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC21.12■□□□□ 0.97
SRFP11831 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC21.12■□□□□ 0.97
SRFP11831 AC005829.2-201ENST00000571422 1056 ntBASIC21.12■□□□□ 0.97
SRFP11831 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
SRFP11831 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
SRFP11831 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.12■□□□□ 0.97
SRFP11831 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SRFP11831 AC116050.2-201ENST00000612102 1779 ntBASIC21.12■□□□□ 0.97
SRFP11831 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC21.12■□□□□ 0.97
SRFP11831 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
SRFP11831 AC068473.5-201ENST00000616428 2072 ntBASIC21.11■□□□□ 0.97
SRFP11831 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.11■□□□□ 0.97
SRFP11831 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
SRFP11831 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SRFP11831 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SRFP11831 PRKY-204ENST00000533551 1019 ntBASIC21.11■□□□□ 0.97
SRFP11831 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
SRFP11831 PPOX-219ENST00000544598 813 ntTSL 2 BASIC21.11■□□□□ 0.97
SRFP11831 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC21.11■□□□□ 0.97
SRFP11831 AL355075.4-201ENST00000554988 638 ntBASIC21.11■□□□□ 0.97
SRFP11831 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.11■□□□□ 0.97
SRFP11831 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SRFP11831 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
SRFP11831 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SRFP11831 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SRFP11831 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.1■□□□□ 0.97
SRFP11831 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SRFP11831 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.1■□□□□ 0.97
SRFP11831 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SRFP11831 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SRFP11831 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SRFP11831 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SRFP11831 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.1■□□□□ 0.97
SRFP11831 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
SRFP11831 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
SRFP11831 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SRFP11831 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
SRFP11831 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC21.1■□□□□ 0.97
SRFP11831 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.1■□□□□ 0.97
SRFP11831 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC21.1■□□□□ 0.97
SRFP11831 CABP2-204ENST00000636477 941 ntTSL 5 BASIC21.1■□□□□ 0.97
SRFP11831 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.1■□□□□ 0.97
SRFP11831 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.1■□□□□ 0.97
SRFP11831 AC026471.6-201ENST00000622954 1905 ntBASIC21.1■□□□□ 0.97
SRFP11831 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SRFP11831 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SRFP11831 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC21.09■□□□□ 0.97
SRFP11831 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.09■□□□□ 0.97
SRFP11831 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms