Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
PF4V1P10720 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC16.36■□□□□ 0.21
PF4V1P10720 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC16.36■□□□□ 0.21
PF4V1P10720 RGMA-211ENST00000557420 989 ntTSL 3 BASIC16.36■□□□□ 0.21
PF4V1P10720 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PF4V1P10720 AC142086.2-201ENST00000569753 217 ntBASIC16.36■□□□□ 0.21
PF4V1P10720 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC16.36■□□□□ 0.21
PF4V1P10720 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC16.36■□□□□ 0.21
PF4V1P10720 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PF4V1P10720 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PF4V1P10720 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
PF4V1P10720 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC16.36■□□□□ 0.21
PF4V1P10720 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PF4V1P10720 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PF4V1P10720 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PF4V1P10720 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PF4V1P10720 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC16.35■□□□□ 0.21
PF4V1P10720 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PF4V1P10720 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
PF4V1P10720 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PF4V1P10720 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PF4V1P10720 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PF4V1P10720 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PF4V1P10720 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
PF4V1P10720 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PF4V1P10720 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PF4V1P10720 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
PF4V1P10720 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC16.35■□□□□ 0.21
PF4V1P10720 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PF4V1P10720 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
PF4V1P10720 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC16.35■□□□□ 0.21
PF4V1P10720 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PF4V1P10720 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC16.35■□□□□ 0.21
PF4V1P10720 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PF4V1P10720 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PF4V1P10720 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PF4V1P10720 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PF4V1P10720 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC16.35■□□□□ 0.21
PF4V1P10720 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PF4V1P10720 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PF4V1P10720 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC16.35■□□□□ 0.21
PF4V1P10720 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PF4V1P10720 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PF4V1P10720 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
PF4V1P10720 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC16.34■□□□□ 0.21
PF4V1P10720 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC16.34■□□□□ 0.21
PF4V1P10720 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC16.34■□□□□ 0.21
PF4V1P10720 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
PF4V1P10720 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PF4V1P10720 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PF4V1P10720 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PF4V1P10720 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC16.34■□□□□ 0.21
PF4V1P10720 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC16.34■□□□□ 0.21
PF4V1P10720 TERF1P5-201ENST00000477545 1207 ntBASIC16.34■□□□□ 0.21
PF4V1P10720 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC16.34■□□□□ 0.21
PF4V1P10720 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC16.34■□□□□ 0.21
PF4V1P10720 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
PF4V1P10720 GAMT-205ENST00000640762 751 ntTSL 5 BASIC16.34■□□□□ 0.21
PF4V1P10720 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PF4V1P10720 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PF4V1P10720 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PF4V1P10720 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
PF4V1P10720 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
PF4V1P10720 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
PF4V1P10720 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC16.34■□□□□ 0.21
PF4V1P10720 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PF4V1P10720 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PF4V1P10720 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PF4V1P10720 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PF4V1P10720 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC16.33■□□□□ 0.21
PF4V1P10720 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PF4V1P10720 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC16.33■□□□□ 0.2
PF4V1P10720 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PF4V1P10720 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC16.33■□□□□ 0.2
PF4V1P10720 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PF4V1P10720 ABHD17AP1-201ENST00000358206 933 ntBASIC16.33■□□□□ 0.2
PF4V1P10720 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC16.33■□□□□ 0.2
PF4V1P10720 CNN2P6-201ENST00000439038 900 ntBASIC16.33■□□□□ 0.2
PF4V1P10720 AC245052.3-201ENST00000450182 901 ntBASIC16.33■□□□□ 0.2
PF4V1P10720 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC16.33■□□□□ 0.2
PF4V1P10720 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC16.33■□□□□ 0.2
PF4V1P10720 AL138781.1-201ENST00000566567 1274 ntBASIC16.33■□□□□ 0.2
PF4V1P10720 SLC7A5P1-201ENST00000568957 537 ntBASIC16.33■□□□□ 0.2
PF4V1P10720 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
PF4V1P10720 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC16.33■□□□□ 0.2
PF4V1P10720 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC16.33■□□□□ 0.2
PF4V1P10720 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
PF4V1P10720 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC16.33■□□□□ 0.2
PF4V1P10720 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
PF4V1P10720 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PF4V1P10720 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PF4V1P10720 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
PF4V1P10720 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
PF4V1P10720 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PF4V1P10720 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PF4V1P10720 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC16.33■□□□□ 0.2
PF4V1P10720 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PF4V1P10720 Z98882.1-201ENST00000622160 2253 ntBASIC16.33■□□□□ 0.2
PF4V1P10720 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
PF4V1P10720 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms