Protein–RNA interactions for Protein: P0DMS9

TMIGD3, Transmembrane domain-containing protein TMIGD3, humanhuman

Predicted RBP Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMIGD3P0DMS9 KRT16P2-201ENST00000414673 1423 ntBASIC18.69■□□□□ 0.58
TMIGD3P0DMS9 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.69■□□□□ 0.58
TMIGD3P0DMS9 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.69■□□□□ 0.58
TMIGD3P0DMS9 AC007322.4-201ENST00000509611 723 ntBASIC18.69■□□□□ 0.58
TMIGD3P0DMS9 AC133552.2-202ENST00000575694 574 ntBASIC18.69■□□□□ 0.58
TMIGD3P0DMS9 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TMIGD3P0DMS9 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.69■□□□□ 0.58
TMIGD3P0DMS9 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TMIGD3P0DMS9 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.69■□□□□ 0.58
TMIGD3P0DMS9 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMIGD3P0DMS9 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TMIGD3P0DMS9 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TMIGD3P0DMS9 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMIGD3P0DMS9 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMIGD3P0DMS9 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.69■□□□□ 0.58
TMIGD3P0DMS9 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.69■□□□□ 0.58
TMIGD3P0DMS9 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
TMIGD3P0DMS9 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMIGD3P0DMS9 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
TMIGD3P0DMS9 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.68■□□□□ 0.58
TMIGD3P0DMS9 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMIGD3P0DMS9 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TMIGD3P0DMS9 AC068338.2-201ENST00000563278 1430 ntBASIC18.68■□□□□ 0.58
TMIGD3P0DMS9 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
TMIGD3P0DMS9 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TMIGD3P0DMS9 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMIGD3P0DMS9 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TMIGD3P0DMS9 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.68■□□□□ 0.58
TMIGD3P0DMS9 GUSBP6-202ENST00000438529 1198 ntBASIC18.68■□□□□ 0.58
TMIGD3P0DMS9 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.68■□□□□ 0.58
TMIGD3P0DMS9 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.68■□□□□ 0.58
TMIGD3P0DMS9 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.68■□□□□ 0.58
TMIGD3P0DMS9 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
TMIGD3P0DMS9 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.68■□□□□ 0.58
TMIGD3P0DMS9 AC142086.2-201ENST00000569753 217 ntBASIC18.68■□□□□ 0.58
TMIGD3P0DMS9 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.68■□□□□ 0.58
TMIGD3P0DMS9 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
TMIGD3P0DMS9 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMIGD3P0DMS9 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TMIGD3P0DMS9 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMIGD3P0DMS9 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMIGD3P0DMS9 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMIGD3P0DMS9 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TMIGD3P0DMS9 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
TMIGD3P0DMS9 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
TMIGD3P0DMS9 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.68■□□□□ 0.58
TMIGD3P0DMS9 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMIGD3P0DMS9 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.67■□□□□ 0.58
TMIGD3P0DMS9 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TMIGD3P0DMS9 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TMIGD3P0DMS9 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TMIGD3P0DMS9 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMIGD3P0DMS9 CYP2T1P-201ENST00000432607 1285 ntBASIC18.67■□□□□ 0.58
TMIGD3P0DMS9 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.67■□□□□ 0.58
TMIGD3P0DMS9 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMIGD3P0DMS9 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.67■□□□□ 0.58
TMIGD3P0DMS9 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TMIGD3P0DMS9 AC008694.1-202ENST00000636953 945 ntBASIC18.67■□□□□ 0.58
TMIGD3P0DMS9 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TMIGD3P0DMS9 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TMIGD3P0DMS9 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
TMIGD3P0DMS9 Z98882.1-201ENST00000622160 2253 ntBASIC18.67■□□□□ 0.58
TMIGD3P0DMS9 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TMIGD3P0DMS9 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TMIGD3P0DMS9 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TMIGD3P0DMS9 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMIGD3P0DMS9 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TMIGD3P0DMS9 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TMIGD3P0DMS9 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TMIGD3P0DMS9 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TMIGD3P0DMS9 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMIGD3P0DMS9 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMIGD3P0DMS9 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TMIGD3P0DMS9 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMIGD3P0DMS9 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.66■□□□□ 0.58
TMIGD3P0DMS9 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.66■□□□□ 0.58
TMIGD3P0DMS9 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TMIGD3P0DMS9 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMIGD3P0DMS9 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TMIGD3P0DMS9 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.66■□□□□ 0.58
TMIGD3P0DMS9 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMIGD3P0DMS9 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
TMIGD3P0DMS9 AC061975.6-201ENST00000579045 1553 ntBASIC18.66■□□□□ 0.58
TMIGD3P0DMS9 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMIGD3P0DMS9 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMIGD3P0DMS9 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMIGD3P0DMS9 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TMIGD3P0DMS9 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.66■□□□□ 0.58
TMIGD3P0DMS9 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.66■□□□□ 0.58
TMIGD3P0DMS9 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMIGD3P0DMS9 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
TMIGD3P0DMS9 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMIGD3P0DMS9 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TMIGD3P0DMS9 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMIGD3P0DMS9 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TMIGD3P0DMS9 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TMIGD3P0DMS9 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
TMIGD3P0DMS9 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.65■□□□□ 0.58
TMIGD3P0DMS9 AC069236.1-201ENST00000604339 616 ntBASIC18.65■□□□□ 0.58
TMIGD3P0DMS9 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms