Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC24.96■■□□□ 1.59
CHGBP05060 AL591742.1-201ENST00000604433 565 ntBASIC24.96■■□□□ 1.59
CHGBP05060 MARS-234ENST00000630571 216 ntTSL 5 BASIC24.96■■□□□ 1.59
CHGBP05060 MARS-235ENST00000630803 183 ntTSL 3 BASIC24.96■■□□□ 1.59
CHGBP05060 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC24.96■■□□□ 1.59
CHGBP05060 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CHGBP05060 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
CHGBP05060 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CHGBP05060 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
CHGBP05060 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CHGBP05060 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC24.96■■□□□ 1.59
CHGBP05060 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC24.96■■□□□ 1.59
CHGBP05060 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
CHGBP05060 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
CHGBP05060 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
CHGBP05060 USP48-205ENST00000421625 2818 ntTSL 2 BASIC24.95■■□□□ 1.59
CHGBP05060 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
CHGBP05060 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC24.95■■□□□ 1.58
CHGBP05060 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC24.95■■□□□ 1.58
CHGBP05060 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.58
CHGBP05060 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC24.95■■□□□ 1.58
CHGBP05060 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CHGBP05060 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC24.94■■□□□ 1.58
CHGBP05060 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
CHGBP05060 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC24.94■■□□□ 1.58
CHGBP05060 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
CHGBP05060 VMO1-204ENST00000441199 741 ntTSL 2 BASIC24.94■■□□□ 1.58
CHGBP05060 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC24.94■■□□□ 1.58
CHGBP05060 OAS3-207ENST00000551007 998 ntTSL 2 BASIC24.94■■□□□ 1.58
CHGBP05060 AC105036.2-201ENST00000569468 176 ntBASIC24.94■■□□□ 1.58
CHGBP05060 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC24.94■■□□□ 1.58
CHGBP05060 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC24.94■■□□□ 1.58
CHGBP05060 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC24.94■■□□□ 1.58
CHGBP05060 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC24.94■■□□□ 1.58
CHGBP05060 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CHGBP05060 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC24.93■■□□□ 1.58
CHGBP05060 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC24.93■■□□□ 1.58
CHGBP05060 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC24.93■■□□□ 1.58
CHGBP05060 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
CHGBP05060 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC24.93■■□□□ 1.58
CHGBP05060 TSPY6P-201ENST00000448518 926 ntBASIC24.93■■□□□ 1.58
CHGBP05060 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
CHGBP05060 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC24.93■■□□□ 1.58
CHGBP05060 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC24.93■■□□□ 1.58
CHGBP05060 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC24.93■■□□□ 1.58
CHGBP05060 AL138781.1-201ENST00000566567 1274 ntBASIC24.93■■□□□ 1.58
CHGBP05060 AL109923.1-201ENST00000618799 583 ntBASIC24.93■■□□□ 1.58
CHGBP05060 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CHGBP05060 PALM-208ENST00000592155 2272 ntTSL 4 BASIC24.93■■□□□ 1.58
CHGBP05060 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CHGBP05060 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
CHGBP05060 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC24.93■■□□□ 1.58
CHGBP05060 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
CHGBP05060 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC24.92■■□□□ 1.58
CHGBP05060 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
CHGBP05060 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
CHGBP05060 AL355472.2-201ENST00000422958 438 ntBASIC24.92■■□□□ 1.58
CHGBP05060 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC24.92■■□□□ 1.58
CHGBP05060 RARRES2P4-201ENST00000514074 484 ntBASIC24.92■■□□□ 1.58
CHGBP05060 AC133552.2-202ENST00000575694 574 ntBASIC24.92■■□□□ 1.58
CHGBP05060 AL121832.2-201ENST00000610979 668 ntBASIC24.92■■□□□ 1.58
CHGBP05060 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC24.92■■□□□ 1.58
CHGBP05060 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC24.92■■□□□ 1.58
CHGBP05060 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CHGBP05060 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
CHGBP05060 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC24.92■■□□□ 1.58
CHGBP05060 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC24.92■■□□□ 1.58
CHGBP05060 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CHGBP05060 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
CHGBP05060 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CHGBP05060 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC24.91■■□□□ 1.58
CHGBP05060 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC24.91■■□□□ 1.58
CHGBP05060 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CHGBP05060 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CHGBP05060 GPX1P1-201ENST00000388829 606 ntBASIC24.91■■□□□ 1.58
CHGBP05060 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC24.91■■□□□ 1.58
CHGBP05060 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC24.91■■□□□ 1.58
CHGBP05060 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC24.91■■□□□ 1.58
CHGBP05060 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC24.91■■□□□ 1.58
CHGBP05060 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC24.91■■□□□ 1.58
CHGBP05060 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
CHGBP05060 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
CHGBP05060 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
CHGBP05060 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CHGBP05060 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
CHGBP05060 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.58
CHGBP05060 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
CHGBP05060 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CHGBP05060 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CHGBP05060 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CHGBP05060 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC24.9■■□□□ 1.58
CHGBP05060 PHB2-213ENST00000546111 858 ntTSL 2 BASIC24.9■■□□□ 1.58
CHGBP05060 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC24.9■■□□□ 1.58
CHGBP05060 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
CHGBP05060 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC24.9■■□□□ 1.58
CHGBP05060 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC24.9■■□□□ 1.58
CHGBP05060 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.58
CHGBP05060 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.58
CHGBP05060 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.58
CHGBP05060 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms