Protein–RNA interactions for Protein: O75818

RPP40, Ribonuclease P protein subunit p40, humanhuman

Known RBP Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40O75818 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
RPP40O75818 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RPP40O75818 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RPP40O75818 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RPP40O75818 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
RPP40O75818 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.25■□□□□ 0.99
RPP40O75818 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.25■□□□□ 0.99
RPP40O75818 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.25■□□□□ 0.99
RPP40O75818 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.25■□□□□ 0.99
RPP40O75818 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
RPP40O75818 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.25■□□□□ 0.99
RPP40O75818 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RPP40O75818 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
RPP40O75818 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RPP40O75818 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
RPP40O75818 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21.25■□□□□ 0.99
RPP40O75818 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.25■□□□□ 0.99
RPP40O75818 AL596275.1-201ENST00000423464 877 ntBASIC21.25■□□□□ 0.99
RPP40O75818 AC091874.3-201ENST00000512672 1195 ntBASIC21.25■□□□□ 0.99
RPP40O75818 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.25■□□□□ 0.99
RPP40O75818 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.25■□□□□ 0.99
RPP40O75818 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
RPP40O75818 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
RPP40O75818 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RPP40O75818 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.25■□□□□ 0.99
RPP40O75818 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RPP40O75818 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RPP40O75818 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
RPP40O75818 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RPP40O75818 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RPP40O75818 AC026310.3-201ENST00000625186 2373 ntBASIC21.24■□□□□ 0.99
RPP40O75818 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RPP40O75818 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC21.24■□□□□ 0.99
RPP40O75818 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.24■□□□□ 0.99
RPP40O75818 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC21.24■□□□□ 0.99
RPP40O75818 AC008175.2-201ENST00000612840 297 ntBASIC21.24■□□□□ 0.99
RPP40O75818 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
RPP40O75818 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RPP40O75818 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RPP40O75818 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
RPP40O75818 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
RPP40O75818 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RPP40O75818 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
RPP40O75818 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.23■□□□□ 0.99
RPP40O75818 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RPP40O75818 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RPP40O75818 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21.23■□□□□ 0.99
RPP40O75818 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.23■□□□□ 0.99
RPP40O75818 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RPP40O75818 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.23■□□□□ 0.99
RPP40O75818 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
RPP40O75818 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RPP40O75818 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.23■□□□□ 0.99
RPP40O75818 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RPP40O75818 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.23■□□□□ 0.99
RPP40O75818 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.23■□□□□ 0.99
RPP40O75818 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RPP40O75818 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RPP40O75818 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.22■□□□□ 0.99
RPP40O75818 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RPP40O75818 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RPP40O75818 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.22■□□□□ 0.99
RPP40O75818 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
RPP40O75818 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RPP40O75818 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
RPP40O75818 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RPP40O75818 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
RPP40O75818 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.22■□□□□ 0.99
RPP40O75818 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC21.22■□□□□ 0.99
RPP40O75818 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.22■□□□□ 0.99
RPP40O75818 MMD2-204ENST00000612910 778 ntTSL 5 BASIC21.22■□□□□ 0.99
RPP40O75818 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.22■□□□□ 0.99
RPP40O75818 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.22■□□□□ 0.99
RPP40O75818 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RPP40O75818 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RPP40O75818 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.21■□□□□ 0.99
RPP40O75818 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
RPP40O75818 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
RPP40O75818 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.21■□□□□ 0.99
RPP40O75818 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RPP40O75818 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RPP40O75818 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
RPP40O75818 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
RPP40O75818 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC21.21■□□□□ 0.99
RPP40O75818 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
RPP40O75818 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RPP40O75818 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
RPP40O75818 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
RPP40O75818 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RPP40O75818 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RPP40O75818 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RPP40O75818 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RPP40O75818 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.21■□□□□ 0.99
RPP40O75818 AC010980.2-201ENST00000587099 1412 ntBASIC21.21■□□□□ 0.99
RPP40O75818 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
RPP40O75818 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RPP40O75818 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RPP40O75818 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
RPP40O75818 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RPP40O75818 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms