Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
LRCH4O75427 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LRCH4O75427 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
LRCH4O75427 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
LRCH4O75427 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.55■■□□□ 1.04
LRCH4O75427 AC243732.1-201ENST00000612648 864 ntBASIC21.55■■□□□ 1.04
LRCH4O75427 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
LRCH4O75427 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
LRCH4O75427 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.55■■□□□ 1.04
LRCH4O75427 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.55■■□□□ 1.04
LRCH4O75427 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
LRCH4O75427 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.55■■□□□ 1.04
LRCH4O75427 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
LRCH4O75427 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
LRCH4O75427 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.55■■□□□ 1.04
LRCH4O75427 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
LRCH4O75427 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
LRCH4O75427 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
LRCH4O75427 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LRCH4O75427 AC073314.1-201ENST00000568729 2216 ntBASIC21.54■■□□□ 1.04
LRCH4O75427 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
LRCH4O75427 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.54■■□□□ 1.04
LRCH4O75427 KRT18P5-201ENST00000436075 1291 ntBASIC21.54■■□□□ 1.04
LRCH4O75427 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
LRCH4O75427 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC21.54■■□□□ 1.04
LRCH4O75427 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.54■■□□□ 1.04
LRCH4O75427 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.54■■□□□ 1.04
LRCH4O75427 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.54■■□□□ 1.04
LRCH4O75427 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC21.54■■□□□ 1.04
LRCH4O75427 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.54■■□□□ 1.04
LRCH4O75427 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC21.54■■□□□ 1.04
LRCH4O75427 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
LRCH4O75427 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
LRCH4O75427 PKD1P6-201ENST00000343738 4769 ntBASIC21.53■■□□□ 1.04
LRCH4O75427 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
LRCH4O75427 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
LRCH4O75427 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LRCH4O75427 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.53■■□□□ 1.04
LRCH4O75427 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.53■■□□□ 1.04
LRCH4O75427 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.53■■□□□ 1.04
LRCH4O75427 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
LRCH4O75427 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.53■■□□□ 1.04
LRCH4O75427 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.53■■□□□ 1.04
LRCH4O75427 MYCNOS-205ENST00000641950 531 ntBASIC21.53■■□□□ 1.04
LRCH4O75427 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.53■■□□□ 1.04
LRCH4O75427 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
LRCH4O75427 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
LRCH4O75427 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
LRCH4O75427 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
LRCH4O75427 AP005212.1-201ENST00000581547 1997 ntBASIC21.52■■□□□ 1.04
LRCH4O75427 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.52■■□□□ 1.04
LRCH4O75427 FP700111.2-201ENST00000619190 1892 ntBASIC21.52■■□□□ 1.04
LRCH4O75427 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.52■■□□□ 1.04
LRCH4O75427 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LRCH4O75427 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.52■■□□□ 1.04
LRCH4O75427 AC116050.2-201ENST00000612102 1779 ntBASIC21.52■■□□□ 1.04
LRCH4O75427 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.52■■□□□ 1.04
LRCH4O75427 AC091799.1-201ENST00000422823 811 ntBASIC21.52■■□□□ 1.04
LRCH4O75427 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.52■■□□□ 1.04
LRCH4O75427 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
LRCH4O75427 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.52■■□□□ 1.04
LRCH4O75427 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
LRCH4O75427 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
LRCH4O75427 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
LRCH4O75427 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
LRCH4O75427 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.52■■□□□ 1.04
LRCH4O75427 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LRCH4O75427 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
LRCH4O75427 LINC01521-201ENST00000504184 1943 ntBASIC21.52■■□□□ 1.04
LRCH4O75427 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
LRCH4O75427 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
LRCH4O75427 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
LRCH4O75427 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
LRCH4O75427 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
LRCH4O75427 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.51■■□□□ 1.03
LRCH4O75427 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
LRCH4O75427 AC092667.1-201ENST00000434301 2586 ntBASIC21.51■■□□□ 1.03
LRCH4O75427 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
LRCH4O75427 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.51■■□□□ 1.03
LRCH4O75427 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC21.51■■□□□ 1.03
LRCH4O75427 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
LRCH4O75427 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.51■■□□□ 1.03
LRCH4O75427 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.51■■□□□ 1.03
LRCH4O75427 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.51■■□□□ 1.03
LRCH4O75427 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
LRCH4O75427 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.51■■□□□ 1.03
LRCH4O75427 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.51■■□□□ 1.03
LRCH4O75427 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.51■■□□□ 1.03
LRCH4O75427 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
LRCH4O75427 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.51■■□□□ 1.03
LRCH4O75427 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
LRCH4O75427 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LRCH4O75427 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
LRCH4O75427 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.5■■□□□ 1.03
LRCH4O75427 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LRCH4O75427 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
LRCH4O75427 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
LRCH4O75427 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LRCH4O75427 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
LRCH4O75427 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms