Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.97■□□□□ 0.79
CNOT3O75175 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.97■□□□□ 0.79
CNOT3O75175 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CNOT3O75175 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CNOT3O75175 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CNOT3O75175 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.97■□□□□ 0.79
CNOT3O75175 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CNOT3O75175 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CNOT3O75175 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CNOT3O75175 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.97■□□□□ 0.79
CNOT3O75175 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.96■□□□□ 0.79
CNOT3O75175 AC007952.6-201ENST00000573168 2673 ntBASIC19.96■□□□□ 0.79
CNOT3O75175 AC003957.1-201ENST00000625108 2673 ntBASIC19.96■□□□□ 0.79
CNOT3O75175 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CNOT3O75175 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CNOT3O75175 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CNOT3O75175 SLC7A5P2-201ENST00000553010 536 ntBASIC19.96■□□□□ 0.79
CNOT3O75175 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.96■□□□□ 0.79
CNOT3O75175 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CNOT3O75175 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.96■□□□□ 0.79
CNOT3O75175 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CNOT3O75175 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CNOT3O75175 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.96■□□□□ 0.79
CNOT3O75175 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.96■□□□□ 0.79
CNOT3O75175 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CNOT3O75175 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CNOT3O75175 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CNOT3O75175 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.95■□□□□ 0.78
CNOT3O75175 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CNOT3O75175 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
CNOT3O75175 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CNOT3O75175 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CNOT3O75175 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CNOT3O75175 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CNOT3O75175 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CNOT3O75175 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CNOT3O75175 CNN2P6-201ENST00000439038 900 ntBASIC19.95■□□□□ 0.78
CNOT3O75175 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.95■□□□□ 0.78
CNOT3O75175 KRT18P20-201ENST00000548986 1279 ntBASIC19.95■□□□□ 0.78
CNOT3O75175 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.95■□□□□ 0.78
CNOT3O75175 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.95■□□□□ 0.78
CNOT3O75175 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.95■□□□□ 0.78
CNOT3O75175 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CNOT3O75175 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
CNOT3O75175 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CNOT3O75175 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
CNOT3O75175 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CNOT3O75175 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.95■□□□□ 0.78
CNOT3O75175 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.95■□□□□ 0.78
CNOT3O75175 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CNOT3O75175 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CNOT3O75175 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CNOT3O75175 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
CNOT3O75175 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CNOT3O75175 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CNOT3O75175 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CNOT3O75175 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CNOT3O75175 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CNOT3O75175 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.94■□□□□ 0.78
CNOT3O75175 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CNOT3O75175 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.94■□□□□ 0.78
CNOT3O75175 AC231657.2-201ENST00000624556 255 ntBASIC19.94■□□□□ 0.78
CNOT3O75175 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CNOT3O75175 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CNOT3O75175 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CNOT3O75175 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CNOT3O75175 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CNOT3O75175 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
CNOT3O75175 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.93■□□□□ 0.78
CNOT3O75175 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
CNOT3O75175 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CNOT3O75175 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CNOT3O75175 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CNOT3O75175 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CNOT3O75175 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.93■□□□□ 0.78
CNOT3O75175 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CNOT3O75175 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CNOT3O75175 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.93■□□□□ 0.78
CNOT3O75175 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.93■□□□□ 0.78
CNOT3O75175 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.93■□□□□ 0.78
CNOT3O75175 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.93■□□□□ 0.78
CNOT3O75175 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.93■□□□□ 0.78
CNOT3O75175 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.93■□□□□ 0.78
CNOT3O75175 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.93■□□□□ 0.78
CNOT3O75175 AL109923.1-201ENST00000618799 583 ntBASIC19.93■□□□□ 0.78
CNOT3O75175 AC010536.3-201ENST00000620306 533 ntBASIC19.93■□□□□ 0.78
CNOT3O75175 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
CNOT3O75175 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CNOT3O75175 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CNOT3O75175 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CNOT3O75175 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CNOT3O75175 AC026471.6-201ENST00000622954 1905 ntBASIC19.92■□□□□ 0.78
CNOT3O75175 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CNOT3O75175 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
CNOT3O75175 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.92■□□□□ 0.78
CNOT3O75175 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.92■□□□□ 0.78
CNOT3O75175 AC007322.1-201ENST00000426983 750 ntBASIC19.92■□□□□ 0.78
CNOT3O75175 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.92■□□□□ 0.78
CNOT3O75175 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.92■□□□□ 0.78
CNOT3O75175 EMC9-206ENST00000560403 872 ntTSL 2 BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms