Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.77■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.77■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.77■□□□□ 0.92
C1QTNF3-AMACRE9PGA6 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.77■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.77■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 CYP21A1P-202ENST00000354927 1481 ntBASIC20.76■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 AC133561.1-201ENST00000568600 2415 ntBASIC20.76■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 KRT18P68-201ENST00000392293 1000 ntBASIC20.76■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.76■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 MIR4651-201ENST00000582622 73 ntBASIC20.76■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.76■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.76■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.75■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.75■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 TMEM191A-211ENST00000637163 1067 ntBASIC20.75■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.74■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.74■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.74■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.74■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.74■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.74■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.74■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.74■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.74■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.74■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.73■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.73■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.73■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 PKD1P6-201ENST00000343738 4769 ntBASIC20.73■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.73■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.73■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.73■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.73■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.73■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.73■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.72■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
C1QTNF3-AMACRE9PGA6 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms