Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC16.33■□□□□ 0.2
RBFOX3A6NFN3 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RBFOX3A6NFN3 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
RBFOX3A6NFN3 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC16.33■□□□□ 0.2
RBFOX3A6NFN3 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RBFOX3A6NFN3 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC16.33■□□□□ 0.2
RBFOX3A6NFN3 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RBFOX3A6NFN3 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
RBFOX3A6NFN3 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
RBFOX3A6NFN3 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RBFOX3A6NFN3 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
RBFOX3A6NFN3 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
RBFOX3A6NFN3 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RBFOX3A6NFN3 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RBFOX3A6NFN3 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
RBFOX3A6NFN3 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RBFOX3A6NFN3 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RBFOX3A6NFN3 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RBFOX3A6NFN3 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RBFOX3A6NFN3 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RBFOX3A6NFN3 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RBFOX3A6NFN3 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
RBFOX3A6NFN3 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RBFOX3A6NFN3 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
RBFOX3A6NFN3 RNF126P1-201ENST00000567452 1320 ntBASIC16.32■□□□□ 0.2
RBFOX3A6NFN3 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RBFOX3A6NFN3 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RBFOX3A6NFN3 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
RBFOX3A6NFN3 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RBFOX3A6NFN3 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
RBFOX3A6NFN3 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RBFOX3A6NFN3 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC16.31■□□□□ 0.2
RBFOX3A6NFN3 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
RBFOX3A6NFN3 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC16.31■□□□□ 0.2
RBFOX3A6NFN3 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RBFOX3A6NFN3 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RBFOX3A6NFN3 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.31■□□□□ 0.2
RBFOX3A6NFN3 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
RBFOX3A6NFN3 MIR4281-201ENST00000580852 62 ntBASIC16.31■□□□□ 0.2
RBFOX3A6NFN3 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RBFOX3A6NFN3 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
RBFOX3A6NFN3 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.31■□□□□ 0.2
RBFOX3A6NFN3 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC16.31■□□□□ 0.2
RBFOX3A6NFN3 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RBFOX3A6NFN3 TCF3P1-201ENST00000423021 1937 ntBASIC16.31■□□□□ 0.2
RBFOX3A6NFN3 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC16.31■□□□□ 0.2
RBFOX3A6NFN3 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
RBFOX3A6NFN3 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RBFOX3A6NFN3 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
RBFOX3A6NFN3 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
RBFOX3A6NFN3 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RBFOX3A6NFN3 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RBFOX3A6NFN3 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
RBFOX3A6NFN3 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RBFOX3A6NFN3 NEFHP1-201ENST00000412845 2629 ntBASIC16.3■□□□□ 0.2
RBFOX3A6NFN3 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RBFOX3A6NFN3 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC16.3■□□□□ 0.2
RBFOX3A6NFN3 DUX4L9-201ENST00000449051 1259 ntBASIC16.3■□□□□ 0.2
RBFOX3A6NFN3 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC16.3■□□□□ 0.2
RBFOX3A6NFN3 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
RBFOX3A6NFN3 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.3■□□□□ 0.2
RBFOX3A6NFN3 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RBFOX3A6NFN3 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RBFOX3A6NFN3 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
RBFOX3A6NFN3 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
RBFOX3A6NFN3 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.3■□□□□ 0.2
RBFOX3A6NFN3 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RBFOX3A6NFN3 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC16.3■□□□□ 0.2
RBFOX3A6NFN3 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RBFOX3A6NFN3 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC16.29■□□□□ 0.2
RBFOX3A6NFN3 AL158211.5-201ENST00000623583 2518 ntBASIC16.29■□□□□ 0.2
RBFOX3A6NFN3 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC16.29■□□□□ 0.2
RBFOX3A6NFN3 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RBFOX3A6NFN3 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC16.29■□□□□ 0.2
RBFOX3A6NFN3 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RBFOX3A6NFN3 AC005082.1-201ENST00000413042 2259 ntBASIC16.29■□□□□ 0.2
RBFOX3A6NFN3 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RBFOX3A6NFN3 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RBFOX3A6NFN3 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RBFOX3A6NFN3 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RBFOX3A6NFN3 RARRES2P2-201ENST00000394842 485 ntBASIC16.29■□□□□ 0.2
RBFOX3A6NFN3 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RBFOX3A6NFN3 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RBFOX3A6NFN3 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RBFOX3A6NFN3 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RBFOX3A6NFN3 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC16.29■□□□□ 0.2
RBFOX3A6NFN3 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RBFOX3A6NFN3 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RBFOX3A6NFN3 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RBFOX3A6NFN3 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RBFOX3A6NFN3 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RBFOX3A6NFN3 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RBFOX3A6NFN3 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RBFOX3A6NFN3 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RBFOX3A6NFN3 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC16.28■□□□□ 0.2
RBFOX3A6NFN3 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC16.28■□□□□ 0.2
RBFOX3A6NFN3 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RBFOX3A6NFN3 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RBFOX3A6NFN3 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RBFOX3A6NFN3 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms