Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TCRBV3S1A0A5B6 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TCRBV3S1A0A5B6 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TCRBV3S1A0A5B6 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.38■□□□□ 0.69
TCRBV3S1A0A5B6 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TCRBV3S1A0A5B6 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.38■□□□□ 0.69
TCRBV3S1A0A5B6 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.38■□□□□ 0.69
TCRBV3S1A0A5B6 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.38■□□□□ 0.69
TCRBV3S1A0A5B6 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TCRBV3S1A0A5B6 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.37■□□□□ 0.69
TCRBV3S1A0A5B6 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TCRBV3S1A0A5B6 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
TCRBV3S1A0A5B6 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.37■□□□□ 0.69
TCRBV3S1A0A5B6 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TCRBV3S1A0A5B6 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TCRBV3S1A0A5B6 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.37■□□□□ 0.69
TCRBV3S1A0A5B6 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
TCRBV3S1A0A5B6 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TCRBV3S1A0A5B6 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.37■□□□□ 0.69
TCRBV3S1A0A5B6 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.37■□□□□ 0.69
TCRBV3S1A0A5B6 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TCRBV3S1A0A5B6 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
TCRBV3S1A0A5B6 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TCRBV3S1A0A5B6 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TCRBV3S1A0A5B6 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TCRBV3S1A0A5B6 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.36■□□□□ 0.69
TCRBV3S1A0A5B6 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
TCRBV3S1A0A5B6 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.36■□□□□ 0.69
TCRBV3S1A0A5B6 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.36■□□□□ 0.69
TCRBV3S1A0A5B6 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TCRBV3S1A0A5B6 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TCRBV3S1A0A5B6 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
TCRBV3S1A0A5B6 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.36■□□□□ 0.69
TCRBV3S1A0A5B6 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.36■□□□□ 0.69
TCRBV3S1A0A5B6 AL158211.5-201ENST00000623583 2518 ntBASIC19.36■□□□□ 0.69
TCRBV3S1A0A5B6 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
TCRBV3S1A0A5B6 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TCRBV3S1A0A5B6 AC092720.2-201ENST00000602388 1665 ntBASIC19.36■□□□□ 0.69
TCRBV3S1A0A5B6 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TCRBV3S1A0A5B6 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TCRBV3S1A0A5B6 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TCRBV3S1A0A5B6 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TCRBV3S1A0A5B6 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TCRBV3S1A0A5B6 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TCRBV3S1A0A5B6 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TCRBV3S1A0A5B6 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TCRBV3S1A0A5B6 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.35■□□□□ 0.69
TCRBV3S1A0A5B6 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
TCRBV3S1A0A5B6 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TCRBV3S1A0A5B6 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.35■□□□□ 0.69
TCRBV3S1A0A5B6 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.35■□□□□ 0.69
TCRBV3S1A0A5B6 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.35■□□□□ 0.69
TCRBV3S1A0A5B6 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TCRBV3S1A0A5B6 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.35■□□□□ 0.69
TCRBV3S1A0A5B6 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.35■□□□□ 0.69
TCRBV3S1A0A5B6 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
TCRBV3S1A0A5B6 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.35■□□□□ 0.69
TCRBV3S1A0A5B6 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TCRBV3S1A0A5B6 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TCRBV3S1A0A5B6 AP000974.1-201ENST00000623909 2387 ntBASIC19.34■□□□□ 0.69
TCRBV3S1A0A5B6 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TCRBV3S1A0A5B6 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TCRBV3S1A0A5B6 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TCRBV3S1A0A5B6 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.34■□□□□ 0.69
TCRBV3S1A0A5B6 AC239859.2-201ENST00000444165 318 ntBASIC19.34■□□□□ 0.69
TCRBV3S1A0A5B6 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.34■□□□□ 0.69
TCRBV3S1A0A5B6 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TCRBV3S1A0A5B6 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.34■□□□□ 0.69
TCRBV3S1A0A5B6 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.34■□□□□ 0.69
TCRBV3S1A0A5B6 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TCRBV3S1A0A5B6 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TCRBV3S1A0A5B6 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TCRBV3S1A0A5B6 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
TCRBV3S1A0A5B6 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TCRBV3S1A0A5B6 TNXA-203ENST00000507684 2038 ntBASIC19.34■□□□□ 0.69
TCRBV3S1A0A5B6 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TCRBV3S1A0A5B6 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TCRBV3S1A0A5B6 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TCRBV3S1A0A5B6 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
TCRBV3S1A0A5B6 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.33■□□□□ 0.69
TCRBV3S1A0A5B6 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
TCRBV3S1A0A5B6 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.69
TCRBV3S1A0A5B6 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.33■□□□□ 0.69
TCRBV3S1A0A5B6 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TCRBV3S1A0A5B6 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TCRBV3S1A0A5B6 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
TCRBV3S1A0A5B6 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.33■□□□□ 0.69
TCRBV3S1A0A5B6 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.33■□□□□ 0.68
TCRBV3S1A0A5B6 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.33■□□□□ 0.68
TCRBV3S1A0A5B6 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.33■□□□□ 0.68
TCRBV3S1A0A5B6 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.33■□□□□ 0.68
TCRBV3S1A0A5B6 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
TCRBV3S1A0A5B6 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TCRBV3S1A0A5B6 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TCRBV3S1A0A5B6 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.33■□□□□ 0.68
TCRBV3S1A0A5B6 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.33■□□□□ 0.68
TCRBV3S1A0A5B6 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.33■□□□□ 0.68
TCRBV3S1A0A5B6 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TCRBV3S1A0A5B6 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
TCRBV3S1A0A5B6 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms