Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CCDC163A0A0D9SF12 AC116050.2-201ENST00000612102 1779 ntBASIC20.62■□□□□ 0.89
CCDC163A0A0D9SF12 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCDC163A0A0D9SF12 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC163A0A0D9SF12 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CCDC163A0A0D9SF12 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.61■□□□□ 0.89
CCDC163A0A0D9SF12 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.61■□□□□ 0.89
CCDC163A0A0D9SF12 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.61■□□□□ 0.89
CCDC163A0A0D9SF12 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC163A0A0D9SF12 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC163A0A0D9SF12 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC163A0A0D9SF12 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CCDC163A0A0D9SF12 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.61■□□□□ 0.89
CCDC163A0A0D9SF12 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC163A0A0D9SF12 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC163A0A0D9SF12 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.61■□□□□ 0.89
CCDC163A0A0D9SF12 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.61■□□□□ 0.89
CCDC163A0A0D9SF12 RARRES2P10-201ENST00000564312 460 ntBASIC20.61■□□□□ 0.89
CCDC163A0A0D9SF12 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.61■□□□□ 0.89
CCDC163A0A0D9SF12 AL023875.1-201ENST00000640777 796 ntBASIC20.61■□□□□ 0.89
CCDC163A0A0D9SF12 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
CCDC163A0A0D9SF12 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC163A0A0D9SF12 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC163A0A0D9SF12 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCDC163A0A0D9SF12 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC163A0A0D9SF12 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC163A0A0D9SF12 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC163A0A0D9SF12 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC163A0A0D9SF12 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC163A0A0D9SF12 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC163A0A0D9SF12 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC163A0A0D9SF12 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC163A0A0D9SF12 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.6■□□□□ 0.89
CCDC163A0A0D9SF12 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.6■□□□□ 0.89
CCDC163A0A0D9SF12 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC163A0A0D9SF12 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC163A0A0D9SF12 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC163A0A0D9SF12 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CCDC163A0A0D9SF12 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.6■□□□□ 0.89
CCDC163A0A0D9SF12 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC163A0A0D9SF12 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.6■□□□□ 0.89
CCDC163A0A0D9SF12 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.6■□□□□ 0.89
CCDC163A0A0D9SF12 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.6■□□□□ 0.89
CCDC163A0A0D9SF12 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CCDC163A0A0D9SF12 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
CCDC163A0A0D9SF12 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CCDC163A0A0D9SF12 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC163A0A0D9SF12 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC163A0A0D9SF12 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCDC163A0A0D9SF12 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC163A0A0D9SF12 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC163A0A0D9SF12 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.59■□□□□ 0.89
CCDC163A0A0D9SF12 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC163A0A0D9SF12 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CCDC163A0A0D9SF12 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.59■□□□□ 0.89
CCDC163A0A0D9SF12 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CCDC163A0A0D9SF12 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC20.59■□□□□ 0.89
CCDC163A0A0D9SF12 AC005829.2-201ENST00000571422 1056 ntBASIC20.59■□□□□ 0.89
CCDC163A0A0D9SF12 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.59■□□□□ 0.89
CCDC163A0A0D9SF12 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC20.59■□□□□ 0.89
CCDC163A0A0D9SF12 AC012306.2-201ENST00000609350 630 ntBASIC20.59■□□□□ 0.89
CCDC163A0A0D9SF12 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CCDC163A0A0D9SF12 SNX21-213ENST00000614929 587 ntTSL 5 BASIC20.59■□□□□ 0.89
CCDC163A0A0D9SF12 AC133561.5-201ENST00000635547 218 ntBASIC20.59■□□□□ 0.89
CCDC163A0A0D9SF12 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.59■□□□□ 0.89
CCDC163A0A0D9SF12 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.59■□□□□ 0.89
CCDC163A0A0D9SF12 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.59■□□□□ 0.89
CCDC163A0A0D9SF12 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.59■□□□□ 0.89
CCDC163A0A0D9SF12 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC163A0A0D9SF12 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC163A0A0D9SF12 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC163A0A0D9SF12 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCDC163A0A0D9SF12 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC163A0A0D9SF12 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC163A0A0D9SF12 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.89
CCDC163A0A0D9SF12 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
CCDC163A0A0D9SF12 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC163A0A0D9SF12 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC163A0A0D9SF12 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.58■□□□□ 0.89
CCDC163A0A0D9SF12 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC163A0A0D9SF12 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC163A0A0D9SF12 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC163A0A0D9SF12 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
CCDC163A0A0D9SF12 AC087499.1-201ENST00000418141 1075 ntBASIC20.58■□□□□ 0.89
CCDC163A0A0D9SF12 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.58■□□□□ 0.89
CCDC163A0A0D9SF12 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.58■□□□□ 0.89
CCDC163A0A0D9SF12 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC163A0A0D9SF12 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.58■□□□□ 0.89
CCDC163A0A0D9SF12 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.58■□□□□ 0.89
CCDC163A0A0D9SF12 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCDC163A0A0D9SF12 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
CCDC163A0A0D9SF12 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.58■□□□□ 0.88
CCDC163A0A0D9SF12 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.57■□□□□ 0.88
CCDC163A0A0D9SF12 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC163A0A0D9SF12 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC163A0A0D9SF12 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCDC163A0A0D9SF12 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.57■□□□□ 0.88
CCDC163A0A0D9SF12 PGM5P4-201ENST00000421970 445 ntBASIC20.57■□□□□ 0.88
CCDC163A0A0D9SF12 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC20.57■□□□□ 0.88
CCDC163A0A0D9SF12 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms