Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.78■□□□□ 0.6
TRAV17A0A0B4J275 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.78■□□□□ 0.6
TRAV17A0A0B4J275 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.78■□□□□ 0.6
TRAV17A0A0B4J275 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV17A0A0B4J275 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
TRAV17A0A0B4J275 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV17A0A0B4J275 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV17A0A0B4J275 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
TRAV17A0A0B4J275 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
TRAV17A0A0B4J275 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.78■□□□□ 0.6
TRAV17A0A0B4J275 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
TRAV17A0A0B4J275 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV17A0A0B4J275 UBE2SP1-201ENST00000450587 669 ntBASIC18.78■□□□□ 0.6
TRAV17A0A0B4J275 RPS2P4-201ENST00000476944 856 ntBASIC18.78■□□□□ 0.6
TRAV17A0A0B4J275 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TRAV17A0A0B4J275 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV17A0A0B4J275 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.78■□□□□ 0.6
TRAV17A0A0B4J275 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV17A0A0B4J275 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.78■□□□□ 0.6
TRAV17A0A0B4J275 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
TRAV17A0A0B4J275 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV17A0A0B4J275 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV17A0A0B4J275 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV17A0A0B4J275 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV17A0A0B4J275 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV17A0A0B4J275 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
TRAV17A0A0B4J275 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
TRAV17A0A0B4J275 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV17A0A0B4J275 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV17A0A0B4J275 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
TRAV17A0A0B4J275 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.77■□□□□ 0.6
TRAV17A0A0B4J275 PGM5P4-201ENST00000421970 445 ntBASIC18.77■□□□□ 0.6
TRAV17A0A0B4J275 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.77■□□□□ 0.6
TRAV17A0A0B4J275 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.77■□□□□ 0.6
TRAV17A0A0B4J275 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
TRAV17A0A0B4J275 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV17A0A0B4J275 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.77■□□□□ 0.6
TRAV17A0A0B4J275 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.77■□□□□ 0.6
TRAV17A0A0B4J275 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
TRAV17A0A0B4J275 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV17A0A0B4J275 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV17A0A0B4J275 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
TRAV17A0A0B4J275 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV17A0A0B4J275 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV17A0A0B4J275 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.76■□□□□ 0.59
TRAV17A0A0B4J275 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV17A0A0B4J275 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV17A0A0B4J275 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.76■□□□□ 0.59
TRAV17A0A0B4J275 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV17A0A0B4J275 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV17A0A0B4J275 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV17A0A0B4J275 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV17A0A0B4J275 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV17A0A0B4J275 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV17A0A0B4J275 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.76■□□□□ 0.59
TRAV17A0A0B4J275 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV17A0A0B4J275 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.76■□□□□ 0.59
TRAV17A0A0B4J275 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.76■□□□□ 0.59
TRAV17A0A0B4J275 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.76■□□□□ 0.59
TRAV17A0A0B4J275 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV17A0A0B4J275 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
TRAV17A0A0B4J275 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.76■□□□□ 0.59
TRAV17A0A0B4J275 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
TRAV17A0A0B4J275 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.76■□□□□ 0.59
TRAV17A0A0B4J275 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
TRAV17A0A0B4J275 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV17A0A0B4J275 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV17A0A0B4J275 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV17A0A0B4J275 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV17A0A0B4J275 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV17A0A0B4J275 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV17A0A0B4J275 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.75■□□□□ 0.59
TRAV17A0A0B4J275 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV17A0A0B4J275 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
TRAV17A0A0B4J275 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV17A0A0B4J275 SOX15-203ENST00000570788 1093 ntBASIC18.75■□□□□ 0.59
TRAV17A0A0B4J275 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.75■□□□□ 0.59
TRAV17A0A0B4J275 AL359736.2-201ENST00000621992 437 ntBASIC18.75■□□□□ 0.59
TRAV17A0A0B4J275 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV17A0A0B4J275 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
TRAV17A0A0B4J275 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV17A0A0B4J275 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
TRAV17A0A0B4J275 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV17A0A0B4J275 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.75■□□□□ 0.59
TRAV17A0A0B4J275 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.74■□□□□ 0.59
TRAV17A0A0B4J275 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV17A0A0B4J275 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV17A0A0B4J275 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.74■□□□□ 0.59
TRAV17A0A0B4J275 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV17A0A0B4J275 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV17A0A0B4J275 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV17A0A0B4J275 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.74■□□□□ 0.59
TRAV17A0A0B4J275 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV17A0A0B4J275 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.74■□□□□ 0.59
TRAV17A0A0B4J275 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.74■□□□□ 0.59
TRAV17A0A0B4J275 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV17A0A0B4J275 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.74■□□□□ 0.59
TRAV17A0A0B4J275 C2orf69P4-201ENST00000565394 541 ntBASIC18.74■□□□□ 0.59
TRAV17A0A0B4J275 FAM197Y4-202ENST00000622692 608 ntBASIC18.74■□□□□ 0.59
TRAV17A0A0B4J275 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms