Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 ANKRD13C-202ENST00000370944 4069 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
SNX18Q96RF0 NAMA-204ENST00000604258 2133 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
SNX18Q96RF0 DCAF1-202ENST00000423656 5946 ntAPPRIS P4 TSL 5 BASIC8.89□□□□□ -0.99
SNX18Q96RF0 RNF148-201ENST00000434824 1304 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
SNX18Q96RF0 RBM23-204ENST00000399922 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
SNX18Q96RF0 WNT2B-203ENST00000369686 10879 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
SNX18Q96RF0 CHD2-201ENST00000394196 9363 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
SNX18Q96RF0 ADIPOQ-201ENST00000320741 4562 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
SNX18Q96RF0 MT2P1-201ENST00000262499 183 ntBASIC8.89□□□□□ -0.99
SNX18Q96RF0 OR11L1-201ENST00000355784 969 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
SNX18Q96RF0 RNA5SP488-201ENST00000364942 116 ntBASIC8.89□□□□□ -0.99
SNX18Q96RF0 MIR671-201ENST00000390183 118 ntBASIC8.89□□□□□ -0.99
SNX18Q96RF0 TSPAN9-202ENST00000407263 956 ntTSL 5 BASIC8.89□□□□□ -0.99
SNX18Q96RF0 AL450226.1-201ENST00000414776 710 ntTSL 2 BASIC8.89□□□□□ -0.99
SNX18Q96RF0 LINC01276-201ENST00000416951 816 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
SNX18Q96RF0 HNRNPA3P14-201ENST00000444546 1150 ntBASIC8.89□□□□□ -0.99
SNX18Q96RF0 MRPL55-223ENST00000459783 694 ntTSL 5 BASIC8.89□□□□□ -0.99
SNX18Q96RF0 RPL12P33-201ENST00000485633 492 ntBASIC8.89□□□□□ -0.99
SNX18Q96RF0 AC011294.1-201ENST00000487094 844 ntTSL 3 BASIC8.89□□□□□ -0.99
SNX18Q96RF0 AC124242.2-201ENST00000517431 1119 ntBASIC8.89□□□□□ -0.99
SNX18Q96RF0 CD3D-204ENST00000529594 422 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
SNX18Q96RF0 ZSCAN9-208ENST00000531981 854 ntTSL 4 BASIC8.89□□□□□ -0.99
SNX18Q96RF0 AL121988.1-201ENST00000542839 560 ntTSL 5 BASIC8.89□□□□□ -0.99
SNX18Q96RF0 PTCD2P1-201ENST00000554393 1136 ntBASIC8.89□□□□□ -0.99
SNX18Q96RF0 AC007342.2-201ENST00000568878 395 ntBASIC8.89□□□□□ -0.99
SNX18Q96RF0 TMSB15B-206ENST00000569577 663 ntAPPRIS P1 TSL 3 BASIC8.89□□□□□ -0.99
SNX18Q96RF0 MIR4283-2-201ENST00000578980 80 ntBASIC8.89□□□□□ -0.99
SNX18Q96RF0 MIR4283-1-201ENST00000582960 80 ntBASIC8.89□□□□□ -0.99
SNX18Q96RF0 AC008742.1-201ENST00000592332 1167 ntBASIC8.89□□□□□ -0.99
SNX18Q96RF0 IGFL2-AS1-203ENST00000598518 1037 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
SNX18Q96RF0 AC008878.1-202ENST00000599312 382 ntAPPRIS P1 TSL 2 BASIC8.89□□□□□ -0.99
SNX18Q96RF0 AC040978.1-201ENST00000617244 1282 ntBASIC8.89□□□□□ -0.99
SNX18Q96RF0 AC084824.3-201ENST00000620472 856 ntBASIC8.89□□□□□ -0.99
SNX18Q96RF0 MAST4-221ENST00000490016 1950 ntTSL 2 BASIC8.89□□□□□ -0.99
SNX18Q96RF0 TOP3A-208ENST00000542570 4116 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
SNX18Q96RF0 ASH2L-202ENST00000428278 2678 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
SNX18Q96RF0 AC104472.1-201ENST00000399242 1585 ntBASIC8.89□□□□□ -0.99
SNX18Q96RF0 ZNF160-214ENST00000601421 4688 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
SNX18Q96RF0 TCF7-202ENST00000378560 2929 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
SNX18Q96RF0 SIDT2-203ENST00000431081 3910 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
SNX18Q96RF0 MALAT1-201ENST00000508832 1519 ntTSL 2 BASIC8.89□□□□□ -0.99
SNX18Q96RF0 FCGR2C-211ENST00000543859 1507 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
SNX18Q96RF0 AARS2-201ENST00000244571 3854 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
SNX18Q96RF0 ABCF2-202ENST00000287844 3546 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
SNX18Q96RF0 ANK2-216ENST00000510275 1770 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
SNX18Q96RF0 WARS-238ENST00000557135 2080 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
SNX18Q96RF0 EIF5A2-201ENST00000295822 5593 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
SNX18Q96RF0 GSG1-202ENST00000351606 1422 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
SNX18Q96RF0 CREB3L2-207ENST00000616381 7133 ntTSL 5 BASIC8.88□□□□□ -0.99
SNX18Q96RF0 LINC02009-201ENST00000635852 2951 ntTSL 3 BASIC8.88□□□□□ -0.99
SNX18Q96RF0 TNFRSF9-204ENST00000615230 5970 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
SNX18Q96RF0 DNAH11-201ENST00000328843 13917 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
SNX18Q96RF0 ADAM3A-208ENST00000495171 2284 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
SNX18Q96RF0 MCOLN2-202ENST00000370608 2871 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
SNX18Q96RF0 TRIM16-202ENST00000416464 3184 ntTSL 2 BASIC8.88□□□□□ -0.99
SNX18Q96RF0 DPY19L4-201ENST00000414645 6197 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
SNX18Q96RF0 TUBBP6-201ENST00000416519 1332 ntBASIC8.88□□□□□ -0.99
SNX18Q96RF0 CABLES1-203ENST00000420687 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
SNX18Q96RF0 RBMY1A1-204ENST00000439108 1879 ntAPPRIS P5 TSL 1 (best) BASIC8.88□□□□□ -0.99
SNX18Q96RF0 AC005165.1-201ENST00000446840 1870 ntTSL 2 BASIC8.88□□□□□ -0.99
SNX18Q96RF0 WDR11-201ENST00000263461 4732 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
SNX18Q96RF0 SPRR1B-201ENST00000307098 620 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
SNX18Q96RF0 RPLP0-202ENST00000313104 912 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
SNX18Q96RF0 WFDC10B-201ENST00000330523 630 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
SNX18Q96RF0 SNORA80C-201ENST00000362917 135 ntBASIC8.88□□□□□ -0.99
SNX18Q96RF0 MAGT1-202ENST00000373336 962 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
SNX18Q96RF0 RNVU1-1-201ENST00000384610 164 ntBASIC8.88□□□□□ -0.99
SNX18Q96RF0 DLG2-206ENST00000398304 783 ntTSL 3 BASIC8.88□□□□□ -0.99
SNX18Q96RF0 AC009494.1-201ENST00000406090 455 ntBASIC8.88□□□□□ -0.99
SNX18Q96RF0 GGCT-204ENST00000409390 767 ntTSL 2 BASIC8.88□□□□□ -0.99
SNX18Q96RF0 AL022724.1-201ENST00000412132 554 ntTSL 3 BASIC8.88□□□□□ -0.99
SNX18Q96RF0 AC007179.2-205ENST00000412409 707 ntTSL 3 BASIC8.88□□□□□ -0.99
SNX18Q96RF0 AC011247.1-202ENST00000417039 1156 ntTSL 5 BASIC8.88□□□□□ -0.99
SNX18Q96RF0 AL133553.1-201ENST00000428391 353 ntTSL 3 BASIC8.88□□□□□ -0.99
SNX18Q96RF0 AC099066.3-201ENST00000434499 301 ntBASIC8.88□□□□□ -0.99
SNX18Q96RF0 RPSAP27-201ENST00000442177 850 ntBASIC8.88□□□□□ -0.99
SNX18Q96RF0 AC004534.1-201ENST00000462678 489 ntBASIC8.88□□□□□ -0.99
SNX18Q96RF0 EXOSC1-210ENST00000485122 564 ntTSL 5 BASIC8.88□□□□□ -0.99
SNX18Q96RF0 TRMT112P5-201ENST00000511173 334 ntBASIC8.88□□□□□ -0.99
SNX18Q96RF0 AC112206.2-202ENST00000514368 756 ntTSL 3 BASIC8.88□□□□□ -0.99
SNX18Q96RF0 OR2AT1P-201ENST00000525935 743 ntBASIC8.88□□□□□ -0.99
SNX18Q96RF0 AP000797.3-201ENST00000537491 548 ntTSL 4 BASIC8.88□□□□□ -0.99
SNX18Q96RF0 LINC02409-201ENST00000547515 576 ntTSL 4 BASIC8.88□□□□□ -0.99
SNX18Q96RF0 FAM181A-AS1-203ENST00000555732 258 ntTSL 3 BASIC8.88□□□□□ -0.99
SNX18Q96RF0 ZFHX2-AS1-203ENST00000556354 931 ntTSL 3 BASIC8.88□□□□□ -0.99
SNX18Q96RF0 AC009660.1-201ENST00000559052 748 ntBASIC8.88□□□□□ -0.99
SNX18Q96RF0 AP000223.1-201ENST00000567517 557 ntBASIC8.88□□□□□ -0.99
SNX18Q96RF0 CD226-202ENST00000577287 1009 ntTSL 3 BASIC8.88□□□□□ -0.99
SNX18Q96RF0 APCDD1-203ENST00000578882 559 ntTSL 3 BASIC8.88□□□□□ -0.99
SNX18Q96RF0 TOMM20P3-201ENST00000579772 389 ntBASIC8.88□□□□□ -0.99
SNX18Q96RF0 RN7SL615P-201ENST00000584065 298 ntBASIC8.88□□□□□ -0.99
SNX18Q96RF0 AC006213.3-201ENST00000586247 517 ntTSL 2 BASIC8.88□□□□□ -0.99
SNX18Q96RF0 ST6GALNAC1-207ENST00000589992 419 ntTSL 2 BASIC8.88□□□□□ -0.99
SNX18Q96RF0 ZNF544-204ENST00000595981 895 ntTSL 3 BASIC8.88□□□□□ -0.99
SNX18Q96RF0 NDUFB1-206ENST00000605997 336 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
SNX18Q96RF0 AC027345.1-201ENST00000611900 500 ntBASIC8.88□□□□□ -0.99
SNX18Q96RF0 AC243571.2-202ENST00000613901 575 ntTSL 4 BASIC8.88□□□□□ -0.99
SNX18Q96RF0 HNRNPCL3-201ENST00000617807 1148 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
SNX18Q96RF0 AC131025.2-201ENST00000622374 422 ntTSL 5 BASIC8.88□□□□□ -0.99
SNX18Q96RF0 ZNF544-220ENST00000627781 383 ntTSL 2 BASIC8.88□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms