Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.31■□□□□ 0.84
CSNK1G3Q9Y6M4 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CSNK1G3Q9Y6M4 FAM99A-202ENST00000538190 1989 ntBASIC20.31■□□□□ 0.84
CSNK1G3Q9Y6M4 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CSNK1G3Q9Y6M4 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CSNK1G3Q9Y6M4 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CSNK1G3Q9Y6M4 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CSNK1G3Q9Y6M4 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.31■□□□□ 0.84
CSNK1G3Q9Y6M4 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CSNK1G3Q9Y6M4 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CSNK1G3Q9Y6M4 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CSNK1G3Q9Y6M4 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CSNK1G3Q9Y6M4 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.3■□□□□ 0.84
CSNK1G3Q9Y6M4 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CSNK1G3Q9Y6M4 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CSNK1G3Q9Y6M4 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CSNK1G3Q9Y6M4 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.3■□□□□ 0.84
CSNK1G3Q9Y6M4 AL355472.2-201ENST00000422958 438 ntBASIC20.3■□□□□ 0.84
CSNK1G3Q9Y6M4 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CSNK1G3Q9Y6M4 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.3■□□□□ 0.84
CSNK1G3Q9Y6M4 AL589743.5-201ENST00000616611 1050 ntBASIC20.3■□□□□ 0.84
CSNK1G3Q9Y6M4 KRT17P1-201ENST00000399211 1546 ntBASIC20.3■□□□□ 0.84
CSNK1G3Q9Y6M4 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CSNK1G3Q9Y6M4 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CSNK1G3Q9Y6M4 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CSNK1G3Q9Y6M4 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CSNK1G3Q9Y6M4 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.29■□□□□ 0.84
CSNK1G3Q9Y6M4 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.29■□□□□ 0.84
CSNK1G3Q9Y6M4 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CSNK1G3Q9Y6M4 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CSNK1G3Q9Y6M4 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CSNK1G3Q9Y6M4 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CSNK1G3Q9Y6M4 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.29■□□□□ 0.84
CSNK1G3Q9Y6M4 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.29■□□□□ 0.84
CSNK1G3Q9Y6M4 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.29■□□□□ 0.84
CSNK1G3Q9Y6M4 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.29■□□□□ 0.84
CSNK1G3Q9Y6M4 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.29■□□□□ 0.84
CSNK1G3Q9Y6M4 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.29■□□□□ 0.84
CSNK1G3Q9Y6M4 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CSNK1G3Q9Y6M4 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CSNK1G3Q9Y6M4 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CSNK1G3Q9Y6M4 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CSNK1G3Q9Y6M4 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CSNK1G3Q9Y6M4 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CSNK1G3Q9Y6M4 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CSNK1G3Q9Y6M4 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CSNK1G3Q9Y6M4 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.28■□□□□ 0.84
CSNK1G3Q9Y6M4 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CSNK1G3Q9Y6M4 AC007322.3-201ENST00000426526 701 ntBASIC20.28■□□□□ 0.84
CSNK1G3Q9Y6M4 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.28■□□□□ 0.84
CSNK1G3Q9Y6M4 AC026366.1-201ENST00000488803 879 ntBASIC20.28■□□□□ 0.84
CSNK1G3Q9Y6M4 AC093827.2-201ENST00000512654 315 ntBASIC20.28■□□□□ 0.84
CSNK1G3Q9Y6M4 DET1-205ENST00000558413 583 ntTSL 4 BASIC20.28■□□□□ 0.84
CSNK1G3Q9Y6M4 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CSNK1G3Q9Y6M4 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
CSNK1G3Q9Y6M4 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CSNK1G3Q9Y6M4 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CSNK1G3Q9Y6M4 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.28■□□□□ 0.84
CSNK1G3Q9Y6M4 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CSNK1G3Q9Y6M4 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.27■□□□□ 0.84
CSNK1G3Q9Y6M4 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CSNK1G3Q9Y6M4 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.27■□□□□ 0.84
CSNK1G3Q9Y6M4 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CSNK1G3Q9Y6M4 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CSNK1G3Q9Y6M4 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CSNK1G3Q9Y6M4 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CSNK1G3Q9Y6M4 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CSNK1G3Q9Y6M4 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CSNK1G3Q9Y6M4 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.27■□□□□ 0.84
CSNK1G3Q9Y6M4 AC006058.3-201ENST00000606217 1069 ntBASIC20.27■□□□□ 0.84
CSNK1G3Q9Y6M4 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.27■□□□□ 0.84
CSNK1G3Q9Y6M4 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CSNK1G3Q9Y6M4 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.27■□□□□ 0.83
CSNK1G3Q9Y6M4 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CSNK1G3Q9Y6M4 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CSNK1G3Q9Y6M4 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CSNK1G3Q9Y6M4 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CSNK1G3Q9Y6M4 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CSNK1G3Q9Y6M4 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CSNK1G3Q9Y6M4 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CSNK1G3Q9Y6M4 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CSNK1G3Q9Y6M4 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CSNK1G3Q9Y6M4 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CSNK1G3Q9Y6M4 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CSNK1G3Q9Y6M4 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.26■□□□□ 0.83
CSNK1G3Q9Y6M4 KRT18P68-201ENST00000392293 1000 ntBASIC20.26■□□□□ 0.83
CSNK1G3Q9Y6M4 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.26■□□□□ 0.83
CSNK1G3Q9Y6M4 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CSNK1G3Q9Y6M4 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CSNK1G3Q9Y6M4 HLA-B-256ENST00000639848 1089 ntBASIC20.26■□□□□ 0.83
CSNK1G3Q9Y6M4 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
CSNK1G3Q9Y6M4 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CSNK1G3Q9Y6M4 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.26■□□□□ 0.83
CSNK1G3Q9Y6M4 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.26■□□□□ 0.83
CSNK1G3Q9Y6M4 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CSNK1G3Q9Y6M4 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CSNK1G3Q9Y6M4 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CSNK1G3Q9Y6M4 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CSNK1G3Q9Y6M4 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.26■□□□□ 0.83
CSNK1G3Q9Y6M4 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms