Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00588Q9Y4M8 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC14.22□□□□□ -0.13
LINC00588Q9Y4M8 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC14.22□□□□□ -0.13
LINC00588Q9Y4M8 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00588Q9Y4M8 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00588Q9Y4M8 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00588Q9Y4M8 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00588Q9Y4M8 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00588Q9Y4M8 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00588Q9Y4M8 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC14.22□□□□□ -0.13
LINC00588Q9Y4M8 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00588Q9Y4M8 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00588Q9Y4M8 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
LINC00588Q9Y4M8 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC14.21□□□□□ -0.13
LINC00588Q9Y4M8 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00588Q9Y4M8 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00588Q9Y4M8 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
LINC00588Q9Y4M8 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00588Q9Y4M8 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
LINC00588Q9Y4M8 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC14.21□□□□□ -0.13
LINC00588Q9Y4M8 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00588Q9Y4M8 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC14.21□□□□□ -0.13
LINC00588Q9Y4M8 AC244015.2-201ENST00000616358 1861 ntBASIC14.21□□□□□ -0.13
LINC00588Q9Y4M8 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
LINC00588Q9Y4M8 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00588Q9Y4M8 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00588Q9Y4M8 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
LINC00588Q9Y4M8 SAPCD2P1-201ENST00000395413 1184 ntBASIC14.21□□□□□ -0.13
LINC00588Q9Y4M8 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00588Q9Y4M8 LSM12P1-201ENST00000411836 588 ntBASIC14.21□□□□□ -0.13
LINC00588Q9Y4M8 AL355472.2-201ENST00000422958 438 ntBASIC14.21□□□□□ -0.13
LINC00588Q9Y4M8 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
LINC00588Q9Y4M8 VMO1-204ENST00000441199 741 ntTSL 2 BASIC14.21□□□□□ -0.13
LINC00588Q9Y4M8 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC14.21□□□□□ -0.13
LINC00588Q9Y4M8 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC14.21□□□□□ -0.13
LINC00588Q9Y4M8 AC100791.3-201ENST00000617619 330 ntBASIC14.21□□□□□ -0.13
LINC00588Q9Y4M8 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
LINC00588Q9Y4M8 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
LINC00588Q9Y4M8 AC116050.2-201ENST00000612102 1779 ntBASIC14.21□□□□□ -0.13
LINC00588Q9Y4M8 DYM-203ENST00000442713 2147 ntTSL 2 BASIC14.21□□□□□ -0.13
LINC00588Q9Y4M8 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
LINC00588Q9Y4M8 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
LINC00588Q9Y4M8 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LINC00588Q9Y4M8 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LINC00588Q9Y4M8 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
LINC00588Q9Y4M8 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
LINC00588Q9Y4M8 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
LINC00588Q9Y4M8 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC14.2□□□□□ -0.14
LINC00588Q9Y4M8 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00588Q9Y4M8 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00588Q9Y4M8 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00588Q9Y4M8 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00588Q9Y4M8 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC14.2□□□□□ -0.14
LINC00588Q9Y4M8 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00588Q9Y4M8 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00588Q9Y4M8 SERPINH1P1-201ENST00000419794 1249 ntBASIC14.2□□□□□ -0.14
LINC00588Q9Y4M8 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC14.2□□□□□ -0.14
LINC00588Q9Y4M8 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC14.2□□□□□ -0.14
LINC00588Q9Y4M8 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC14.2□□□□□ -0.14
LINC00588Q9Y4M8 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00588Q9Y4M8 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC14.2□□□□□ -0.14
LINC00588Q9Y4M8 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC14.2□□□□□ -0.14
LINC00588Q9Y4M8 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC14.2□□□□□ -0.14
LINC00588Q9Y4M8 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00588Q9Y4M8 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC14.2□□□□□ -0.14
LINC00588Q9Y4M8 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00588Q9Y4M8 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00588Q9Y4M8 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
LINC00588Q9Y4M8 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00588Q9Y4M8 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC14.19□□□□□ -0.14
LINC00588Q9Y4M8 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00588Q9Y4M8 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00588Q9Y4M8 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00588Q9Y4M8 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
LINC00588Q9Y4M8 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00588Q9Y4M8 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC14.19□□□□□ -0.14
LINC00588Q9Y4M8 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC14.19□□□□□ -0.14
LINC00588Q9Y4M8 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00588Q9Y4M8 DUSP5P2-201ENST00000426873 1033 ntBASIC14.19□□□□□ -0.14
LINC00588Q9Y4M8 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC14.19□□□□□ -0.14
LINC00588Q9Y4M8 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC14.19□□□□□ -0.14
LINC00588Q9Y4M8 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC14.19□□□□□ -0.14
LINC00588Q9Y4M8 RHEB-204ENST00000472642 900 ntTSL 3 BASIC14.19□□□□□ -0.14
LINC00588Q9Y4M8 AC097658.1-201ENST00000475555 843 ntBASIC14.19□□□□□ -0.14
LINC00588Q9Y4M8 AC091874.3-201ENST00000512672 1195 ntBASIC14.19□□□□□ -0.14
LINC00588Q9Y4M8 BET1L-207ENST00000529614 560 ntTSL 5 BASIC14.19□□□□□ -0.14
LINC00588Q9Y4M8 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC14.19□□□□□ -0.14
LINC00588Q9Y4M8 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC14.19□□□□□ -0.14
LINC00588Q9Y4M8 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
LINC00588Q9Y4M8 CYP2T3P-201ENST00000601990 817 ntBASIC14.19□□□□□ -0.14
LINC00588Q9Y4M8 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00588Q9Y4M8 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
LINC00588Q9Y4M8 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC14.19□□□□□ -0.14
LINC00588Q9Y4M8 KRT17P1-201ENST00000399211 1546 ntBASIC14.19□□□□□ -0.14
LINC00588Q9Y4M8 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00588Q9Y4M8 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
LINC00588Q9Y4M8 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LINC00588Q9Y4M8 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00588Q9Y4M8 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LINC00588Q9Y4M8 PALM-207ENST00000590161 2137 ntTSL 4 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms